RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 SLC39A5Q6ZMH5 540 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 CIR1Q86X95 450 aaPredicted RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 SELENOMQ8WWX9 145 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 SLC7A6OSQ96CW6 309 aaPredicted RBP9.93□□□□□ -0.82
TRAF1-202ENST00000540010 ASB2Q96Q27 587 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 DNAJC28Q9NX36 388 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 ARL15Q9NXU5 204 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 TRPM5Q9NZQ8 1165 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 SELENONQ9NZV5 590 aa9.93□□□□□ -0.82
TRAF1-202ENST00000540010 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.92□□□□□ -0.82
TRAF1-202ENST00000540010 SEC24AO95486 1093 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 DLDP09622 509 aaKnown RBP9.92□□□□□ -0.82
TRAF1-202ENST00000540010 HAPLN1P10915 354 aaPredicted RBP9.92□□□□□ -0.82
TRAF1-202ENST00000540010 RFX3P48380 749 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 RPS6KA3P51812 740 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 SLC18A1P54219 525 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 AP5B1Q2VPB7 878 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 SPANXN2Q5MJ10 180 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 PAOXQ6QHF9 649 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 ADHFE1Q8IWW8 467 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 CLHC1Q8NHS4 586 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 DENND1AQ8TEH3 1009 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 MOCOSQ96EN8 888 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 TBATAQ96M53 351 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 EPB41L1Q9H4G0 881 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.92□□□□□ -0.82
TRAF1-202ENST00000540010 DUSP12Q9UNI6 340 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 RBMX2Q9Y388 322 aaKnown RBP9.92□□□□□ -0.82
TRAF1-202ENST00000540010 TMEM233B4DJY2 109 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 H3BN98 237 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 LRATO95237 230 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 NCK1P16333 377 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 RHOQP17081 205 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 CHRNA4P43681 627 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 KPNA1P52294 538 aaPredicted RBP9.92□□□□□ -0.82
TRAF1-202ENST00000540010 TRAF3Q13114 568 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 PIK3R6Q5UE93 754 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 FAM45BPQ6NSW5 357 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 TRIM69Q86WT6 500 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 ZNF540Q8NDQ6 660 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 RDH11Q8TC12 318 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 ZNF558Q96NG5 402 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 APOL4Q9BPW4 351 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 CAPN10Q9HC96 672 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 UBA2Q9UBT2 640 aaPredicted RBP9.92□□□□□ -0.82
TRAF1-202ENST00000540010 DNMT3LQ9UJW3 386 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 C3orf18Q9UK00 162 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 CEP350Q5VT06 3117 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 SDK1Q7Z5N4 2213 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 ASNA1O43681 348 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 DNAJA2O60884 412 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 URODP06132 367 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 GSNP06396 782 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 CD68P34810 354 aaPredicted RBP9.92□□□□□ -0.82
TRAF1-202ENST00000540010 ALDH9A1P49189 494 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 PLD1Q13393 1074 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 NADK2Q4G0N4 442 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 MS4A13Q5J8X5 152 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 CFAP52Q8N1V2 620 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 POC5Q8NA72 575 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 FAM45AQ8TCE6 357 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 BTBD9Q96Q07 612 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 NUAK2Q9H093 628 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 LIN28AQ9H9Z2 209 aaKnown RBP9.92□□□□□ -0.82
TRAF1-202ENST00000540010 CXorf21Q9HAI6 301 aa9.92□□□□□ -0.82
TRAF1-202ENST00000540010 PRR23AA6NEV1 266 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 ULK1O75385 1050 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 GMPRP36959 345 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 MAGEA3P43357 314 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 SIM2Q14190 667 aaPredicted RBP9.91□□□□□ -0.82
TRAF1-202ENST00000540010 ARMCX4Q5H9R4 360 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 SETD9Q8NE22 299 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 CAPSLQ8WWF8 208 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 C19orf60Q96EN9 201 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 HMCESQ96FZ2 354 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 YME1L1Q96TA2 773 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 MLPHQ9BV36 600 aaPredicted RBP9.91□□□□□ -0.82
TRAF1-202ENST00000540010 KRT84Q9NSB2 600 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 SAGE1Q9NXZ1 904 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 CAB39Q9Y376 341 aaPredicted RBP9.91□□□□□ -0.82
TRAF1-202ENST00000540010 THSD7BQ9C0I4 1608 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 PDLIM1O00151 329 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 TRIM24O15164 1050 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 CNTN5O94779 1100 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 KCNH1O95259 989 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 IGLV3-25P01717 112 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 ST8SIA6P61647 398 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 SFT2D3Q587I9 215 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 PAGE2BQ5JRK9 111 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 GLYATQ6IB77 296 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 TMEM214Q6NUQ4 689 aaKnown RBP9.91□□□□□ -0.82
TRAF1-202ENST00000540010 FBXL22Q6P050 247 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 RSPO2Q6UXX9 243 aaPredicted RBP9.91□□□□□ -0.82
TRAF1-202ENST00000540010 TMCO2Q7Z6W1 182 aaPredicted RBP9.91□□□□□ -0.82
TRAF1-202ENST00000540010 LRRC49Q8IUZ0 686 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 OR2T34Q8NGX1 318 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 OR2T3Q8NH03 318 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 C2orf15Q8WU43 125 aaKnown RBP9.91□□□□□ -0.82
TRAF1-202ENST00000540010 HEXDCQ8WVB3 486 aa9.91□□□□□ -0.82
TRAF1-202ENST00000540010 CDK5RAP1Q96SZ6 601 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms