RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 CHMP1AQ9HD42 196 aaPredicted RBP6.51□□□□□ -1.37
TRAV11-201ENST00000539512 PAG1Q9NWQ8 432 aa6.51□□□□□ -1.37
TRAV11-201ENST00000539512 PTPRCP08575 1304 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 PCSK5Q92824 1860 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 A0A0G2JPF8 293 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 PLSCR5A0PG75 271 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 HNRNPCL3B7ZW38 293 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 MID1O15344 667 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 LINC00271P0C7V0 271 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 HNRNPCL4P0DMR1 293 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 TGFB3P10600 412 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 ZNF12P17014 697 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 UGT1A1P22309 533 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 NR2F2P24468 414 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 USP8P40818 1118 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 FOXG1P55316 489 aaPredicted RBP6.5□□□□□ -1.37
TRAV11-201ENST00000539512 PRPF4BQ13523 1007 aaKnown RBP6.5□□□□□ -1.37
TRAV11-201ENST00000539512 KIF19Q2TAC6 998 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 BMP2KLQ5H9B9 411 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 TPRG1Q6ZUI0 275 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 KBTBD6Q86V97 674 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 PM20D2Q8IYS1 436 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 ZNF34Q8IZ26 560 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 RASGEF1CQ8N431 466 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 SLC5A8Q8N695 610 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 BICD1Q96G01 975 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 MARK4Q96L34 752 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 SLF1Q9BQI6 1058 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 MRPL1Q9BYD6 325 aaKnown RBP6.5□□□□□ -1.37
TRAV11-201ENST00000539512 SLC35C2Q9NQQ7 365 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.5□□□□□ -1.37
TRAV11-201ENST00000539512 ANKEF1Q9NU02 776 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 POU2F3Q9UKI9 436 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 KCNS2Q9ULS6 477 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 PCDHGA5Q9Y5G8 931 aa6.5□□□□□ -1.37
TRAV11-201ENST00000539512 IGKV2D-30A0A075B6S6 120 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 OR2A25A4D2G3 310 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 HNRNPCL2B2RXH8 293 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 FAM90A26D6RGX4 464 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 IPO8O15397 1037 aaKnown RBP6.49□□□□□ -1.37
TRAV11-201ENST00000539512 RSL1D1O76021 490 aaKnown RBP6.49□□□□□ -1.37
TRAV11-201ENST00000539512 SELLP14151 372 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 POLR2CP19387 275 aaPredicted RBP6.49□□□□□ -1.37
TRAV11-201ENST00000539512 S1PR1P21453 382 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 CORO1AP31146 461 aaKnown RBP6.49□□□□□ -1.37
TRAV11-201ENST00000539512 CCKBRP32239 447 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 CLDN20P56880 219 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 PPP2R2BQ00005 443 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 MVPQ14764 893 aaKnown RBP6.49□□□□□ -1.37
TRAV11-201ENST00000539512 IL17RCQ8NAC3 791 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 AVL9Q8NBF6 648 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 ACVR1CQ8NER5 493 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 LILRB1Q8NHL6 650 aaPredicted RBP6.49□□□□□ -1.37
TRAV11-201ENST00000539512 DUSP19Q8WTR2 217 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 SLC38A5Q8WUX1 472 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 FIG4Q92562 907 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 PIGTQ969N2 578 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 LRRC59Q96AG4 307 aaKnown RBP6.49□□□□□ -1.37
TRAV11-201ENST00000539512 SLC22A18Q96BI1 424 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 IGSF21Q96ID5 467 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 DUX5Q96PT3 197 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 UBTD1Q9HAC8 227 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 NKIRAS2Q9NYR9 191 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 TAS2R14Q9NYV8 317 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 MORF4L1Q9UBU8 362 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 DNAJB4Q9UDY4 337 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 PASKQ96RG2 1323 aa6.49□□□□□ -1.37
TRAV11-201ENST00000539512 SAA2-SAA4A0A096LPE2 208 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 MAGEA13PA6NCF6 341 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 GLOD5A6NK44 160 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 TIMM44O43615 452 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 PLPP2O43688 288 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 ZBTB11O95625 1053 aaPredicted RBP6.48□□□□□ -1.37
TRAV11-201ENST00000539512 TUBBP07437 444 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 LIG4P49917 911 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 MMP14P50281 582 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 NANOS2P60321 138 aaKnown RBP6.48□□□□□ -1.37
TRAV11-201ENST00000539512 PSMC6P62333 389 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 EEF1A1P68104 462 aaKnown RBP6.48□□□□□ -1.37
TRAV11-201ENST00000539512 COG7P83436 770 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 PLIN5Q00G26 463 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 PCLAFQ15004 111 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 DLG2Q15700 870 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 CCDC96Q2M329 555 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 EEF1A1P5Q5VTE0 462 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 KRT79Q5XKE5 535 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 C16orf54Q6UWD8 224 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 PRPF39Q86UA1 669 aaKnown RBP6.48□□□□□ -1.37
TRAV11-201ENST00000539512 LINC00346Q8IVM7 164 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 OR8H2Q8N162 312 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 SNRNP27Q8WVK2 155 aaKnown RBP6.48□□□□□ -1.37
TRAV11-201ENST00000539512 DACH2Q96NX9 599 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 HGH1Q9BTY7 390 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 IL25Q9H293 177 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 AMACRQ9UHK6 382 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 PLAGL1Q9UM63 463 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 PCDHGB1Q9Y5G3 927 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 TNFRSF18Q9Y5U5 241 aa6.48□□□□□ -1.37
TRAV11-201ENST00000539512 MAGED1Q9Y5V3 778 aaPredicted RBP6.48□□□□□ -1.37
TRAV11-201ENST00000539512 LNP1A1A4G5 178 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms