RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 C9orf57Q5W0N0 161 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 BEND5Q7L4P6 421 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 SPATA19Q7Z5L4 167 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 PTGR2Q8N8N7 351 aaPredicted RBP18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 ITFG1Q8TB96 612 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 DYNC2LI1Q8TCX1 351 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 FAR1Q8WVX9 515 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 KCTD13Q8WZ19 329 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 C18orf25Q96B23 403 aaPredicted RBP18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 TEX37Q96LM6 180 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 KCNA7Q96RP8 456 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 OSBPL10Q9BXB5 764 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 CCDC90BQ9GZT6 254 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 INTS7Q9NVH2 962 aaKnown RBP18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 PAK1IP1Q9NWT1 392 aaPredicted RBP18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 RNF181Q9P0P0 153 aa18.46■□□□□ 0.55
SFSWAP-207ENST00000538548 PTGES3LE9PB15 166 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 NDUFB5O43674 189 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 NPPAP01160 153 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 CYBBP04839 570 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 CD40LGP29965 261 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 CASP2P42575 452 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 EMX1Q04741 257 aaPredicted RBP18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 CHRNB3Q05901 458 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 RAB44Q7Z6P3 723 aaPredicted RBP18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 PTERQ96BW5 349 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 TNIP3Q96KP6 325 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 FSD1LQ9BXM9 530 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 PIF1Q9H611 641 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 LTB4R2Q9NPC1 389 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 AIG1Q9NVV5 245 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 OR12D3Q9UGF7 316 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 BTRCQ9Y297 605 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 TNPO2O14787 897 aaKnown RBP18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 TPD52L2O43399 206 aaKnown RBP18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 KATNA1O75449 491 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 SIX3O95343 332 aaPredicted RBP18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 CCDC159P0C7I6 412 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 PCNAP12004 261 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 NPR3P17342 541 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 RPS12P25398 132 aaKnown RBP18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 CHRNA4P43681 627 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 ISL1P61371 349 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 PPP2R2BQ00005 443 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 FBXO47Q5MNV8 452 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 SULT1C3Q6IMI6 304 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 GALNT7Q86SF2 657 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 RHOXF1Q8NHV9 184 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 CAPSLQ8WWF8 208 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 EXT2Q93063 718 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 ZNF486Q96H40 463 aaPredicted RBP18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 YME1L1Q96TA2 773 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 SMURF2Q9HAU4 748 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 POLR3BQ9NW08 1133 aaPredicted RBP18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 USE1Q9NZ43 259 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 TESMINQ9Y4I5 508 aa18.45■□□□□ 0.54
SFSWAP-207ENST00000538548 TTC34A8MYJ7 566 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 LRIG2O94898 1065 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 VTNP04004 478 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 CES1P23141 567 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 CCNCP24863 283 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 ADAM17P78536 824 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 KCNAB2Q13303 367 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 CAMK2BQ13554 666 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 LRIT3Q3SXY7 679 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 IL31Q6EBC2 164 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 DTWD1Q8N5C7 304 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 RORBQ92753 470 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 ISG20Q96AZ6 181 aaKnown RBP18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 PPP1R2P1Q96PQ5 205 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 BTBD2Q9BX70 525 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 ANKRD34BA5PLL1 514 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 ASNA1O43681 348 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 SLC22A3O75751 556 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 BEST1O76090 585 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 SEC24AO95486 1093 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 GSNP06396 782 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 ACVR2AP27037 513 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 EIF2DP41214 584 aaKnown RBP18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 CDKN2DP55273 166 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 TMEM236Q5W0B7 351 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 P2RY8Q86VZ1 359 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 HID1Q8IV36 788 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 ZNF419Q96HQ0 510 aaPredicted RBP18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 DACH2Q96NX9 599 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 DDIT4Q9NX09 232 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 SNX10Q9Y5X0 201 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 DICER1Q9UPY3 1922 aaKnown RBP18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 BRCA2P51587 3418 aa18.44■□□□□ 0.54
SFSWAP-207ENST00000538548 ILVBLA1L0T0 632 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 FAM92AA1XBS5 289 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 PMPCBO75439 489 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 ANXA6P08133 673 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 PRR35P0CG20 571 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 ALDH7A1P49419 539 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 POLR2JP52435 117 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 VBP1P61758 197 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 NOL9Q5SY16 702 aaKnown RBP18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 RANBP10Q6VN20 620 aa18.43■□□□□ 0.54
SFSWAP-207ENST00000538548 FKBP9P1Q75LS8 142 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms