RNA–Protein interactions for RNA: ENST00000538266.5

SNHG1-208, Transcript of small nucleolar RNA host gene 1, human

TSL 3 BASIC

Gene SNHG1, Length 347 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-208	ENST00000538266	SZT2	Q5T011	3432 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	MIA3	Q5JRA6	1907 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	DOCK4	Q8N1I0	1966 aa		4.36	□□□□□ -1.71
SNHG1-208	ENST00000538266	hCG_1818297	A0A087WSY0	165 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	GOLGA6L10	A0A0M3HER8	536 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	EDDM13	A0A1B0GTR0	161 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	CXorf51A	A0A1B0GTR3	108 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PRSS38	A1L453	326 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	VGLL3	A8MV65	326 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PRRT4	C9JH25	899 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266		K7EQS6	105 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	APOC4-APOC2	K7ER74	178 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	MCF2L	O15068	1137 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	DCLK1	O15075	740 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	TRIM24	O15164	1050 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	MTSS1	O43312	755 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	KDELR3	O43731	214 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	MFSD11	O43934	449 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	CEP104	O60308	925 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	KDM1A	O60341	852 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	SNAP91	O60641	907 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PRAMEF11	O60813	436 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	SHOX2	O60902	331 aa	Predicted RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	RNASEH1	O60930	286 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	ZNF189	O75820	626 aa	Predicted RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PDGFB	P01127	241 aa	Predicted RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	APOC2	P02655	101 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	DCN	P07585	359 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	SRPRA	P08240	638 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	ZNF888	P0CJ79	500 aa	Predicted RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	CHRNB1	P11230	501 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	HOXB2	P14652	356 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	HNRNPL	P14866	589 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	TCP1	P17987	556 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	AOC1	P19801	751 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	IL4R	P24394	825 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	NTSR1	P30989	418 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	CXCR5	P32302	372 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	CNR2	P34972	360 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PTPN7	P35236	360 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	ACVRL1	P37023	503 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	GARS	P41250	739 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	ETV4	P43268	484 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	RPS9	P46781	194 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	STK19	P49842	368 aa	Predicted RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	MEOX1	P50221	254 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	SERPINH1	P50454	418 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PEX5	P50542	639 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PAPOLA	P51003	745 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	CLCN5	P51795	746 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	DGKE	P52429	567 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PLK1	P53350	603 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	RRAD	P55042	308 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PPP2CB	P62714	309 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PPP2CA	P67775	309 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	GALNT2	Q10471	571 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	ZNF234	Q14588	700 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	ZNF235	Q14590	738 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PAFAH1B3	Q15102	231 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PCOLCE	Q15113	449 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PDCD1	Q15116	288 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PDK1	Q15118	436 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	TMEM31	Q5JXX7	168 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	DCAF12L1	Q5VU92	463 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	TMEM215	Q68D42	235 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	NCBP2-AS2	Q69YL0	99 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	SLC9A4	Q6AI14	798 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	LINGO4	Q6UY18	593 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266		Q6ZS52	159 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	BBS12	Q6ZW61	710 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	LARP4	Q71RC2	724 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	DSG4	Q86SJ6	1040 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	SFTPA1	Q8IWL2	248 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	RYBP	Q8N488	228 aa	Predicted RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	SPEM1	Q8N4L4	309 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	CCDC33	Q8N5R6	958 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PQLC3	Q8N755	202 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PAF1	Q8N7H5	531 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	PLD5	Q8N7P1	536 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	IL17RC	Q8NAC3	791 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	ATP11C	Q8NB49	1132 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	KDM1B	Q8NB78	822 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	NOA1	Q8NC60	698 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	OR52K2	Q8NGK3	314 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	FAM76A	Q8TAV0	307 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	TFB1M	Q8WVM0	346 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	MAIP1	Q8WWC4	291 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	CASKIN2	Q8WXE0	1202 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	ARHGEF2	Q92974	986 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	CLDN23	Q96B33	292 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	HAUS1	Q96CS2	278 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	P2RY11	Q96G91	374 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	RPL10L	Q96L21	214 aa	Known RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	GDAP1L1	Q96MZ0	367 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	ZNF599	Q96NL3	588 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	NAP1L3	Q99457	506 aa	Predicted RBP	4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	TLR10	Q9BXR5	811 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	OSBPL8	Q9BZF1	889 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	SLC39A8	Q9C0K1	460 aa		4.35	□□□□□ -1.71
SNHG1-208	ENST00000538266	BRD8	Q9H0E9	1235 aa		4.35	□□□□□ -1.71

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