RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 SMNDC1O75940 238 aaKnown RBP eCLIP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 GJB6O95452 261 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PRKCGP05129 697 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 CBSLP0DN79 551 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PNLIPP16233 465 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PGAM1P18669 254 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 COL9A1P20849 921 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ALAS2P22557 587 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 HRH2P25021 359 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 RBL1P28749 1068 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 AKT1P31749 480 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 CBSP35520 551 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 HMGCLP35914 325 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 NSG1P42857 185 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 B2MP61769 119 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 MSLNQ13421 630 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TRA2AQ13595 282 aaKnown RBP eCLIP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SEPT6Q14141 434 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 NR0B2Q15466 257 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SYTL3Q4VX76 610 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TRIM61Q5EBN2 209 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TMTC4Q5T4D3 741 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 KIAA0930Q6ICG6 404 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TRNP1Q6NT89 227 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PARS2Q7L3T8 475 aaKnown RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 LYSMD3Q7Z3D4 306 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ZNF572Q7Z3I7 529 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ABI3BPQ7Z7G0 1075 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 GALNT7Q86SF2 657 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 LRRTM4Q86VH4 590 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 CIR1Q86X95 450 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 KLHDC8BQ8IXV7 354 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SRRM1Q8IYB3 904 aaKnown RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PYROXD2Q8N2H3 581 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TMEM130Q8N3G9 435 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 MMGT1Q8N4V1 131 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SPERTQ8NA61 448 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 GOLM1Q8NBJ4 401 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 MDGA1Q8NFP4 955 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ATL1Q8WXF7 558 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SLC22A18Q96BI1 424 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 BTBD6Q96KE9 485 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 RPL10LQ96L21 214 aaKnown RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 MOGAT1Q96PD6 335 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 KRT12Q99456 494 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 CD180Q99467 661 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TSC22D3Q99576 134 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 C17orf62Q9BQA9 187 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SPATA16Q9BXB7 569 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TLR10Q9BXR5 811 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PCBD2Q9H0N5 130 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 RABEP2Q9H5N1 569 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 UCK1Q9HA47 277 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 TMPRSS4Q9NRS4 437 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 INIPQ9NRY2 104 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ETNK2Q9NVF9 386 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ZDHHC3Q9NYG2 299 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 REXO2Q9Y3B8 237 aaKnown RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 MAD1L1Q9Y6D9 718 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 C17orf113A0A1B0GUU1 675 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 FAM72CH0Y354 149 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 H7C0S8 307 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 DNALI1O14645 258 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SLC30A4O14863 429 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PRPF4O43172 522 aaKnown RBP eCLIP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 VPS26AO75436 327 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 IGHEP01854 428 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 HLA-DQB2P05538 268 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 GP1BAP07359 652 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 THEGLP0DJG4 465 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 C6P13671 934 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 HLA-EP13747 358 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ITGB6P18564 788 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PTGER3P43115 390 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ATXN1P54253 815 aaKnown RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SKOR1P84550 965 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ACTN3Q08043 901 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SLC10A7Q0GE19 358 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 GPS1Q13098 491 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PRKAA1Q13131 559 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 KLF1Q13351 362 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 QPCTQ16769 361 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 FSCBQ5H9T9 825 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 FAM72AQ5TYM5 149 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 FAM72DQ6L9T8 149 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 PLBD1Q6P4A8 553 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 CASC4Q6P4E1 433 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 WASH2PQ6VEQ5 465 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 LIPIQ6XZB0 460 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ZNF600Q6ZNG1 722 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 CYS1Q717R9 158 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 BTN2A1Q7KYR7 527 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ERMP1Q7Z2K6 904 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 SLC26A11Q86WA9 606 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 FAM72BQ86X60 149 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ZNF567Q8N184 647 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 FAM160A2Q8N612 972 aaPredicted RBP3.55□□□□□ -1.84
PTPN22-211ENST00000538253 FAM71DQ8N9W8 422 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 HM13Q8TCT9 377 aa3.55□□□□□ -1.84
PTPN22-211ENST00000538253 ZNF398Q8TD17 642 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms