RNA–Protein interactions for RNA: ENST00000537849.1

SPARC-207, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 218 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-207ENST00000537849 CLDN19Q8N6F1 224 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 ANKRD42Q8N9B4 389 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 OR14C36Q8NHC7 312 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 GLYATL1Q969I3 302 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 NUS1Q96E22 293 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 TSPAN17Q96FV3 270 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 UBXN10Q96LJ8 280 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 VPS35Q96QK1 796 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 VPS11Q9H270 941 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 KDM4CQ9H3R0 1056 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 POLMQ9NP87 494 aaPredicted RBP11.61□□□□□ -0.55
SPARC-207ENST00000537849 CD93Q9NPY3 652 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 LATS2Q9NRM7 1088 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 PCMTD2Q9NV79 361 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 ZNF358Q9NW07 568 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 KCTD5Q9NXV2 234 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 TMEM216Q9P0N5 145 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 USP36Q9P275 1121 aaKnown RBP11.61□□□□□ -0.55
SPARC-207ENST00000537849 MBD1Q9UIS9 605 aaPredicted RBP11.61□□□□□ -0.55
SPARC-207ENST00000537849 TLK1Q9UKI8 766 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 EMCNQ9ULC0 261 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 GRID1Q9ULK0 1009 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 RUVBL2Q9Y230 463 aaKnown RBP11.61□□□□□ -0.55
SPARC-207ENST00000537849 ANKRD6Q9Y2G4 727 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 ACOT9Q9Y305 439 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 PCDHB1Q9Y5F3 818 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 COMMD10Q9Y6G5 202 aa11.61□□□□□ -0.55
SPARC-207ENST00000537849 A0A087X1B8 175 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 A0A1W2PQU0 124 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 IQCF5A8MTL0 148 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 TM9SF1O15321 606 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 SGTAO43765 313 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 DNAJC6O75061 913 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 NIPSNAP2O75323 286 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 RHOBTB1O94844 696 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 ZWINTO95229 277 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 PAK4O96013 591 aaPredicted RBP11.6□□□□□ -0.55
SPARC-207ENST00000537849 IGLV3-19P01714 112 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 GSTA1P08263 222 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 ACADMP11310 421 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 NSG1P42857 185 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 TPMTP51580 245 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 SLC12A2P55011 1212 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 RPS21P63220 83 aaKnown RBP11.6□□□□□ -0.55
SPARC-207ENST00000537849 GUCY1A3Q02108 690 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 MAP7D1Q3KQU3 841 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 TTC31Q49AM3 519 aaPredicted RBP11.6□□□□□ -0.55
SPARC-207ENST00000537849 RAPH1Q70E73 1250 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 HORMAD1Q86X24 394 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 CENPLQ8N0S6 344 aaPredicted RBP11.6□□□□□ -0.55
SPARC-207ENST00000537849 TMEM151AQ8N4L1 468 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 PLA2G15Q8NCC3 412 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 NAT14Q8WUY8 206 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 ANKRD49Q8WVL7 239 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 HMGB4Q8WW32 186 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 ASB12Q8WXK4 309 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 FUBP1Q96AE4 644 aaKnown RBP11.6□□□□□ -0.55
SPARC-207ENST00000537849 NXNL1Q96CM4 212 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 COPS8Q99627 209 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 SLC30A3Q99726 388 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 CLPBQ9H078 707 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 CHRDQ9H2X0 955 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 POPDC3Q9HBV1 291 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 PREBQ9HCU5 417 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 MBNL1Q9NR56 388 aaKnown RBP11.6□□□□□ -0.55
SPARC-207ENST00000537849 IGSF5Q9NSI5 407 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 INTS9Q9NV88 658 aaKnown RBP11.6□□□□□ -0.55
SPARC-207ENST00000537849 NKIRAS1Q9NYS0 192 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 TAS2R13Q9NYV9 303 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 DHRS7Q9Y394 339 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 OAS3Q9Y6K5 1087 aaKnown RBP11.6□□□□□ -0.55
SPARC-207ENST00000537849 NCOR1O75376 2440 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 CACNA1IQ9P0X4 2223 aa11.6□□□□□ -0.55
SPARC-207ENST00000537849 TBC1D3DA0A087WVF3 549 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 TBC1D3IA0A087WXS9 549 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 TBC1D3EA0A087X179 549 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 TBC1D3KA0A087X1G2 549 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 TBC1D3FA6NER0 549 aaPredicted RBP11.59□□□□□ -0.55
SPARC-207ENST00000537849 TBC1D3LB9A6J9 549 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 GLRA3O75311 464 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 KLHL2O95198 593 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 TBC1D3HP0C7X1 549 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 ATP1B2P14415 290 aaPredicted RBP11.59□□□□□ -0.55
SPARC-207ENST00000537849 ACSL1P33121 698 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 SLC26A3P40879 764 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 SKIV2L2P42285 1042 aaKnown RBP11.59□□□□□ -0.55
SPARC-207ENST00000537849 GPR1P46091 355 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 RPS9P46781 194 aaKnown RBP11.59□□□□□ -0.55
SPARC-207ENST00000537849 CLCN7P51798 805 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 TMEM115Q12893 351 aaPredicted RBP11.59□□□□□ -0.55
SPARC-207ENST00000537849 LRRC14Q15048 493 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 LDLRAP1Q5SW96 308 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 ZNF648Q5T619 568 aaPredicted RBP11.59□□□□□ -0.55
SPARC-207ENST00000537849 N4BP2L1Q5TBK1 243 aaPredicted RBP11.59□□□□□ -0.55
SPARC-207ENST00000537849 TBC1D3GQ6DHY5 549 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 TTC19Q6DKK2 380 aaPredicted RBP11.59□□□□□ -0.55
SPARC-207ENST00000537849 TBC1D3CQ6IPX1 549 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 KIAA1161Q6NSJ0 714 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 PNCKQ6P2M8 343 aa11.59□□□□□ -0.55
SPARC-207ENST00000537849 LVRNQ6Q4G3 990 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms