RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 PRPF19Q9UMS4 504 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 RUVBL2Q9Y230 463 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ACOT9Q9Y305 439 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 KCTD3Q9Y597 815 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 RGSL1A5PLK6 1076 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 GOLGA8TH3BQL2 631 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 TK2O00142 265 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 NPHS1O60500 1241 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 NDST3O95803 873 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 UGT2B4P06133 528 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CTSLP07711 333 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ALPIP09923 528 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CTPS1P17812 591 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 TFEBP19484 476 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SERPINB5P36952 375 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 RPS6KA3P51812 740 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 METAP1P53582 386 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SEC13P55735 322 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SNRPD1P62314 119 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 XIAPP98170 497 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 HERC3Q15034 1050 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 LEXMQ3ZCV2 418 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ARL13AQ5H913 290 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SEL1L3Q68CR1 1132 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 LRRC8EQ6NSJ5 796 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ESRP1Q6NXG1 681 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 KIAA0408Q6ZU52 694 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 DEFB107AQ8IZN7 70 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 FSTL5Q8N475 847 aaPredicted RBP12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 RP9Q8TA86 221 aaKnown RBP12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 GBP5Q96PP8 586 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 TTC1Q99614 292 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CACNA2D2Q9NY47 1150 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 POMPQ9Y244 141 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ARL5AQ9Y689 179 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PIAS3Q9Y6X2 628 aa12.87□□□□□ -0.35
CDK5RAP3-202ENST00000536708 A0A087X1B8 175 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 FZD6O60353 706 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 FGF1P05230 155 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CHRNGP07510 517 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 STMN1P16949 149 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PAMP19021 973 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 HLA-DPA1P20036 260 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 MPSTP25325 297 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 IL12RB1P42701 662 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 WASP42768 502 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 DNAJB13P59910 316 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 RPL26P61254 145 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CUL3Q13618 768 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SLC14A2Q15849 920 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CARD16Q5EG05 197 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 DHDDSQ86SQ9 333 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 METTL3Q86U44 580 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CACUL1Q86Y37 369 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SLC41A1Q8IVJ1 513 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 LSMEM2Q8N112 164 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 KCTD4Q8WVF5 259 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ISG20Q96AZ6 181 aaKnown RBP12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 LENG8Q96PV6 779 aaPredicted RBP12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CEP44Q9C0F1 390 aa12.86□□□□□ -0.35
CDK5RAP3-202ENST00000536708 LOC100653049A0A140TA62 436 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 FAM95CA0A1B0GW59 222 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 E9PBE3 544 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CASQ2O14958 399 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PHGDHO43175 533 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 DLX3O60479 287 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 KLHL41O60662 606 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 KRT34O76011 436 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 VAPBO95292 243 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PGLSO95336 258 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 BAG2O95816 211 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ASLP04424 464 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PIK3R1P27986 724 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 GALK1P51570 392 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 POLE2P56282 527 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 POU4F1Q01851 419 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 BCL2L1Q07817 233 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 TBL3Q12788 808 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CDC16Q13042 620 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 EIF4HQ15056 248 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PON2Q15165 354 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 MYLK3Q32MK0 819 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 LSM12Q3MHD2 195 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SERPINA13PQ6UXR4 307 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 RNF111Q6ZNA4 994 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 GALNT7Q86SF2 657 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 KBTBD6Q86V97 674 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 PNPLA1Q8N8W4 532 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 RANBP9Q96S59 729 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 P2RY13Q9BPV8 354 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 VCX3BQ9H321 246 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ATP13A3Q9H7F0 1226 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 ZDHHC2Q9UIJ5 367 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 CXorf51AA0A1B0GTR3 108 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 A8MX80 341 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 LDB2O43679 373 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 LEFTY1O75610 366 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 APODP05090 189 aa12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 SRPRAP08240 638 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-202ENST00000536708 UBTFL6P0CB48 400 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms