RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 MOCS1Q9NZB8 636 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 CCDC167Q9P0B6 97 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 EGFL7Q9UHF1 273 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 A8MV72 311 aaPredicted RBP13.89□□□□□ -0.19
LIG1-203ENST00000536218 GSNP06396 782 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 CAPN1P07384 714 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 CASP3P42574 277 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 FXNQ16595 210 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 SPPL2CQ8IUH8 684 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 SCML4Q8N228 414 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 SPATA22Q8NHS9 363 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 FCRL2Q96LA5 508 aaPredicted RBP13.89□□□□□ -0.19
LIG1-203ENST00000536218 FCRL3Q96P31 734 aaPredicted RBP13.89□□□□□ -0.19
LIG1-203ENST00000536218 PKMYT1Q99640 499 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 ENPP5Q9UJA9 477 aa13.89□□□□□ -0.19
LIG1-203ENST00000536218 MKI67P46013 3256 aaKnown RBP13.89□□□□□ -0.19
LIG1-203ENST00000536218 TCRBV3S1A0A5B6 114 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 RPLP2P05387 115 aaKnown RBP13.88□□□□□ -0.19
LIG1-203ENST00000536218 TFEBP19484 476 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 PPP2R2BQ00005 443 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 FAM214AQ32MH5 1076 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 OTUD3Q5T2D3 398 aaPredicted RBP13.88□□□□□ -0.19
LIG1-203ENST00000536218 TIFABQ6ZNK6 161 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 SCD5Q86SK9 330 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 DDIASQ8IXT1 998 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 ABI1Q8IZP0 508 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 DTX3Q8N9I9 347 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 PSD4Q8NDX1 1056 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 CDKL2Q92772 493 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 MFSD3Q96ES6 412 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 PGAP3Q96FM1 320 aaPredicted RBP13.88□□□□□ -0.19
LIG1-203ENST00000536218 TMEM246Q9BRR3 403 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 C9orf16Q9BUW7 83 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 UNC93B1Q9H1C4 597 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 C12orf4Q9NQ89 552 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 RGS18Q9NS28 235 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 SLCO3A1Q9UIG8 710 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 TESMINQ9Y4I5 508 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 TBX1O43435 398 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 SCO2O43819 266 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 TRIM13O60858 407 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 TBX18O95935 607 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 HMBSP08397 361 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 SAT1P21673 171 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 FASP25445 335 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 CST5P28325 142 aaPredicted RBP13.88□□□□□ -0.19
LIG1-203ENST00000536218 RPL14P50914 215 aaKnown RBP13.88□□□□□ -0.19
LIG1-203ENST00000536218 SLC7A2P52569 658 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 PPP1R3AQ16821 1122 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 IMPG1Q17R60 797 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 FAM171A1Q5VUB5 890 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 LYPD8Q6UX82 237 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 FKBP9P1Q75LS8 142 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 BEND7Q8N7W2 519 aaPredicted RBP13.88□□□□□ -0.19
LIG1-203ENST00000536218 URGCPQ8TCY9 931 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 SPAG4Q9NPE6 437 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 MRPL40Q9NQ50 206 aaKnown RBP13.88□□□□□ -0.19
LIG1-203ENST00000536218 OSER1Q9NX31 292 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 BFARQ9NZS9 450 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 VANGL2Q9ULK5 521 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 V9GYQ6 96 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 SHROOM3Q8TF72 1996 aa13.88□□□□□ -0.19
LIG1-203ENST00000536218 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.87□□□□□ -0.19
LIG1-203ENST00000536218 IRAK2O43187 625 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 CPNE6O95741 557 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 MT-CYBP00156 380 aaPredicted RBP13.87□□□□□ -0.19
LIG1-203ENST00000536218 POLBP06746 335 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 ARSAP15289 507 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 PGAM1P18669 254 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 ATP6V1B2P21281 511 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 IL10P22301 178 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 AIF1P55008 147 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 AGKQ53H12 422 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 ARL13AQ5H913 290 aaPredicted RBP13.87□□□□□ -0.19
LIG1-203ENST00000536218 STXBP5Q5T5C0 1151 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 CADM2Q8N3J6 435 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 CNTD1Q8N815 330 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 OR7A2PQ8NGA2 310 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 OR2T34Q8NGX1 318 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 OR2T3Q8NH03 318 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 ACMSDQ8TDX5 336 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 ATL1Q8WXF7 558 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 OMA1Q96E52 524 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 UROC1Q96N76 676 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 MUS81Q96NY9 551 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 VPS35Q96QK1 796 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 MLPHQ9BV36 600 aaPredicted RBP13.87□□□□□ -0.19
LIG1-203ENST00000536218 OR2B2Q9GZK3 357 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 CHRAC1Q9NRG0 131 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 ABCC13Q9NSE7 274 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 SMPD3Q9NY59 655 aaPredicted RBP13.87□□□□□ -0.19
LIG1-203ENST00000536218 BAG5Q9UL15 447 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 A0A1W2PQ45 241 aaPredicted RBP13.87□□□□□ -0.19
LIG1-203ENST00000536218 A0A1W2PQY0 241 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 TRIM64A6NGJ6 449 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 MLNP12872 115 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 TPD52P55327 224 aaPredicted RBP13.87□□□□□ -0.19
LIG1-203ENST00000536218 RFTN1Q14699 578 aaPredicted RBP13.87□□□□□ -0.19
LIG1-203ENST00000536218 DEFB115Q30KQ5 88 aa13.87□□□□□ -0.19
LIG1-203ENST00000536218 TFAP2DQ7Z6R9 452 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms