RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 SPATA31D3P0C874 917 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 UMPSP11172 480 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 CHRM3P20309 590 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 RGRP47804 291 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 IL2P60568 153 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 DUSP4Q13115 394 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 NFYCQ13952 458 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 AASDHQ4L235 1098 aaPredicted RBP15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 SPATA31D4Q6ZUB0 917 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 SYVN1Q86TM6 617 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 ADGRG5Q8IZF4 528 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 OR56A4Q8NGH8 313 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 C2orf15Q8WU43 125 aaKnown RBP15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 ALG2Q9H553 416 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 TIMMDC1Q9NPL8 285 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 SCUBE2Q9NQ36 999 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 ZNF225Q9UK10 706 aa15.9■□□□□ 0.14
CHMP1A-202ENST00000535997 ILVBLA1L0T0 632 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 ANKRD66B4E2M5 251 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 TBC1D4O60343 1298 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 SNX2O60749 519 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 TMCC1O94876 653 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 VNN2O95498 520 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 PRDX3P30048 256 aaKnown RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 AGTR2P50052 363 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 CCT8P50990 548 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 YBX1P67809 324 aaKnown RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 PLOD1Q02809 727 aaPredicted RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 RSPO2Q6UXX9 243 aaPredicted RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 SAPCD2Q86UD0 394 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 FAM47BQ8NA70 645 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 DNAJB14Q8TBM8 379 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 FAM110BQ8TC76 370 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 VPS33AQ96AX1 596 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 TEX37Q96LM6 180 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 ADGRE3Q9BY15 652 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 TUBA8Q9NY65 449 aaPredicted RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 ATXN10Q9UBB4 475 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 TRMT6Q9UJA5 497 aaKnown RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 RNF103-CHMP3A0A140T963 221 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 NPEPPSL1A6NEC2 478 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 SAC3D1A6NKF1 404 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 PLOD2O00469 737 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 DLGAP1O14490 977 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 CA12O43570 354 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 TRMUO75648 421 aaKnown RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 BMP10O95393 424 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 MYF6P23409 242 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 SLC5A2P31639 672 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 ZFP36L2P47974 494 aaKnown RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 CDKN1CP49918 316 aaPredicted RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 ADARP55265 1226 aaKnown RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 EEFSECP57772 596 aaKnown RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 ERVK-8P63133 956 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 MERTKQ12866 999 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 PDCD4Q53EL6 469 aaKnown RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 FBXO48Q5FWF7 155 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 GPSM1Q86YR5 675 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 PIANPQ8IYJ0 282 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 CMTR2Q8IYT2 770 aaKnown RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 ABI1Q8IZP0 508 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 TMEM199Q8N511 208 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 GRIN3AQ8TCU5 1115 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 GIPC2Q8TF65 315 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 TTLL2Q9BWV7 592 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 RIC8BQ9NVN3 520 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 ZIM2Q9NZV7 527 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 RSL24D1Q9UHA3 163 aaKnown RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 LEF1Q9UJU2 399 aaPredicted RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 AGO1Q9UL18 857 aaKnown RBP15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 COMMD10Q9Y6G5 202 aa15.89■□□□□ 0.13
CHMP1A-202ENST00000535997 DYTNA2CJ06 578 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 CCDC154A6NI56 674 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 NCF1BA6NI72 391 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 SLC38A8A6NNN8 435 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 NCF1CA8MVU1 366 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 NCF1P14598 390 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 GSK3BP49841 420 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 CDK9P50750 372 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 RPS6KA3P51812 740 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 POLR2JP52435 117 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 ACLYP53396 1101 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 UFM1P61960 85 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 RPS24P62847 133 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 LIPEQ05469 1076 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 CYP51A1Q16850 503 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 KCTD21Q4G0X4 260 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 TMTC4Q5T4D3 741 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 ARHGAP22Q7Z5H3 698 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 SPRED1Q7Z699 444 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 RNF180Q86T96 592 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 FIBCD1Q8N539 461 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 PAPD5Q8NDF8 572 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 EEF1AKMT1Q8WVE0 214 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 KCNJ9Q92806 393 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 ZNF512Q96ME7 567 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 SLC30A3Q99726 388 aa15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 KCTD14Q9BQ13 255 aaPredicted RBP15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 DDX18Q9NVP1 670 aaKnown RBP15.88■□□□□ 0.13
CHMP1A-202ENST00000535997 SMOXQ9NWM0 555 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms