RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 SNX2O60749 519 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 CYBBP04839 570 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 GALTP07902 379 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 CKMT2P17540 419 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 RPL17P18621 184 aaKnown RBP13.05□□□□□ -0.32
LDLR-203ENST00000535915 MAGEA8P43361 318 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 RNF219Q5W0B1 726 aaPredicted RBP13.05□□□□□ -0.32
LDLR-203ENST00000535915 UGT3A1Q6NUS8 523 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 BLOC1S3Q6QNY0 202 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 SCIMPQ6UWF3 145 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 ZBTB49Q6ZSB9 765 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 SYVN1Q86TM6 617 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 EEF1AKMT1Q8WVE0 214 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 LINGO1Q96FE5 620 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 TMEM79Q9BSE2 394 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 TRIM8Q9BZR9 551 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 ARMC1Q9NVT9 282 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 PCTPQ9UKL6 214 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 GPR45Q9Y5Y3 372 aa13.05□□□□□ -0.32
LDLR-203ENST00000535915 A0A0U1RQS6 177 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 A0A1B0GVM2 712 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 ZNF840PA6NDX5 716 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 E5RI56 91 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 ZSCAN9O15535 394 aaPredicted RBP13.04□□□□□ -0.32
LDLR-203ENST00000535915 STC2O76061 302 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 ESRRBO95718 433 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 SLC6A2P23975 617 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 TPP2P29144 1249 aaPredicted RBP13.04□□□□□ -0.32
LDLR-203ENST00000535915 KCNK10P57789 538 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 IL2P60568 153 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 YBX1P67809 324 aaKnown RBP13.04□□□□□ -0.32
LDLR-203ENST00000535915 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.04□□□□□ -0.32
LDLR-203ENST00000535915 CTSL3PQ5NE16 218 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 TBCELQ5QJ74 424 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 TXNDC11Q6PKC3 985 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 LINGO4Q6UY18 593 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 SPATA19Q7Z5L4 167 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 RBM12BQ8IXT5 1001 aaKnown RBP13.04□□□□□ -0.32
LDLR-203ENST00000535915 PDZD8Q8NEN9 1154 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 PLEKHG4BQ96PX9 1271 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 CMTM6Q9NX76 183 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 CD274Q9NZQ7 290 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 ANAPC1Q9H1A4 1944 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 DHRS12A0PJE2 317 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 TBKBP1A7MCY6 615 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 BAIAP3O94812 1187 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 MLYCDO95822 493 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 TSPAN12O95859 305 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 UROSP10746 265 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 HSD17B1P14061 328 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 CES1P23141 567 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 SP3Q02447 781 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 BNIP2Q12982 314 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 NFYCQ13952 458 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 INPP5AQ14642 412 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 OGFOD2Q6N063 350 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 TAS2R42Q7RTR8 314 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 GPSM1Q86YR5 675 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 CPNE9Q8IYJ1 553 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 BCL7CQ8WUZ0 217 aaPredicted RBP13.04□□□□□ -0.32
LDLR-203ENST00000535915 VPS33AQ96AX1 596 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 PLD4Q96BZ4 506 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 CCM2LQ9NUG4 571 aaPredicted RBP13.04□□□□□ -0.32
LDLR-203ENST00000535915 ZNF225Q9UK10 706 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 RNF11Q9Y3C5 154 aa13.04□□□□□ -0.32
LDLR-203ENST00000535915 AQP12BA6NM10 295 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 KLK8O60259 260 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 ALDH1A1P00352 501 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 F11P03951 625 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 OR1D2P34982 312 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 APLP1P51693 650 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 NAA20P61599 178 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 TXNL4AP83876 142 aaKnown RBP13.03□□□□□ -0.32
LDLR-203ENST00000535915 TWF1Q12792 350 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 APOFQ13790 326 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 PABPC1LQ4VXU2 614 aaKnown RBP13.03□□□□□ -0.32
LDLR-203ENST00000535915 KRT80Q6KB66 452 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 ERMP1Q7Z2K6 904 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 EFL1Q7Z2Z2 1120 aaKnown RBP13.03□□□□□ -0.32
LDLR-203ENST00000535915 AQP12AQ8IXF9 295 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 ANKFN1Q8N957 763 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 OR56A4Q8NGH8 313 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 DNAJB14Q8TBM8 379 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 CD200R1Q8TD46 325 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 TEX37Q96LM6 180 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 ACOX2Q99424 681 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 C1QTNF3Q9BXJ4 246 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 NUSAP1Q9BXS6 441 aaKnown RBP13.03□□□□□ -0.32
LDLR-203ENST00000535915 OCEL1Q9H607 264 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 DNAAF2Q9NVR5 837 aaKnown RBP13.03□□□□□ -0.32
LDLR-203ENST00000535915 AIG1Q9NVV5 245 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 EIF2B4Q9UI10 523 aaKnown RBP13.03□□□□□ -0.32
LDLR-203ENST00000535915 A0A1W2PP18 115 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 SAC3D1A6NKF1 404 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 PDLIM1O00151 329 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 SOCS2O14508 198 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 VILLO15195 856 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 HTRA2O43464 458 aaPredicted RBP13.03□□□□□ -0.32
LDLR-203ENST00000535915 TPST1O60507 370 aa13.03□□□□□ -0.32
LDLR-203ENST00000535915 BMP2P12643 396 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms