RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 UVRAGQ9P2Y5 699 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 ZNHIT2Q9UHR6 403 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 CD84Q9UIB8 345 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 CAPN11Q9UMQ6 739 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 CHKBQ9Y259 395 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 KCNMB2Q9Y691 235 aa11.07□□□□□ -0.64
CLSTN3-206ENST00000535668 A0A087X0T9 212 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 EPOP01588 193 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 ATP1A1P05023 1023 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 HLA-DQB2P05538 268 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 FAM228BP0C875 321 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 GP1BBP13224 206 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 OAS2P29728 719 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 EPHB1P54762 984 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 NFKB2Q00653 900 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 DSC2Q02487 901 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 DMPKQ09013 629 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 SLC10A2Q12908 348 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 PAPD7Q5XG87 772 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 DENND2CQ68D51 928 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 SLC9A4Q6AI14 798 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 ALKBH5Q6P6C2 394 aaKnown RBP11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 DOK6Q6PKX4 331 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 CHST15Q7LFX5 561 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 C11orf96Q7Z7L8 435 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 TRIM74Q86UV6 250 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 FAM129CQ86XR2 697 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 PHYKPLQ8IUZ5 450 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 CARFQ8N187 725 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 ZFPM2Q8WW38 1151 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 STARD8Q92502 1023 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 MIB2Q96AX9 1013 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 ABHD17AQ96GS6 310 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 SLC41A2Q96JW4 573 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 OLFM3Q96PB7 478 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 SMIM14Q96QK8 99 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 C19orf43Q9BQ61 176 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 NUP85Q9BW27 656 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 ZFYVE1Q9HBF4 777 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 ZNF624Q9P2J8 865 aaPredicted RBP11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 ATXN10Q9UBB4 475 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 ANAPC7Q9UJX3 599 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 KCND3Q9UK17 655 aa11.06□□□□□ -0.64
CLSTN3-206ENST00000535668 CREBBPQ92793 2442 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 A0A0U1RQS6 177 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 C1orf232A0A0U1RR37 186 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 KLHL33A6NCF5 533 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 C21orf140B9A014 251 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 PYCARD-AS1I3L0S3 204 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 KMOO15229 486 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 MT-ND3P03897 115 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 SKILP12757 684 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 ZNF8P17098 575 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 MPSTP25325 297 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 HMGCLP35914 325 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 SLC19A1P41440 591 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 NOP2P46087 812 aaKnown RBP11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 CAPZBP47756 277 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 KLRB1Q12918 225 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 MMRN1Q13201 1228 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 LAMB3Q13751 1172 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 KRT81Q14533 505 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 TCEAL1Q15170 157 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 ANO6Q4KMQ2 910 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 LRRC38Q5VT99 294 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 ADGRG6Q86SQ4 1221 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 KMT5CQ86Y97 462 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 ZNF547Q8IVP9 402 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 CCDC13Q8IYE1 715 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 PLD5Q8N7P1 536 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 NCSTNQ92542 709 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 GLYATL1Q969I3 302 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 RNF157Q96PX1 679 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 TRIM4Q9C037 500 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 SLC25A51Q9H1U9 297 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 APMAPQ9HDC9 416 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 MYO1AQ9UBC5 1043 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 DNMT3AQ9Y6K1 912 aaPredicted RBP11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 RPS6KL1Q9Y6S9 549 aa11.05□□□□□ -0.64
CLSTN3-206ENST00000535668 UTP20O75691 2785 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 GOLGA6CA6NDK9 693 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 GOLGA6BA6NDN3 693 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 C3orf70A6NLC5 250 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 GOLGA6L22H0YM25 854 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 INPP4BO15327 924 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 MTA2O94776 668 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 UBXN7O94888 489 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 MSL3P1P0C860 447 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 GOLGA6DP0CG33 693 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 ACP5P13686 325 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 BRAFP15056 766 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 ZNF7P17097 686 aaPredicted RBP11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 NELFEP18615 380 aaKnown RBP11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 TCN2P20062 427 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 F8A1P23610 371 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 PMS2P54278 862 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 GBE1Q04446 702 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 SEPT6Q14141 434 aa11.04□□□□□ -0.64
CLSTN3-206ENST00000535668 TAZQ16635 292 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms