RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-205	ENST00000535375	PERP	Q96FX8	193 aa		4.88	□□□□□ -1.63
PRKDC-205	ENST00000535375	WDFY2	Q96P53	400 aa		4.88	□□□□□ -1.63
PRKDC-205	ENST00000535375	SMC6	Q96SB8	1091 aa		4.88	□□□□□ -1.63
PRKDC-205	ENST00000535375	TMEM39B	Q9GZU3	492 aa		4.88	□□□□□ -1.63
PRKDC-205	ENST00000535375	PIGM	Q9H3S5	423 aa		4.88	□□□□□ -1.63
PRKDC-205	ENST00000535375	MAGIX	Q9H6Y5	334 aa		4.88	□□□□□ -1.63
PRKDC-205	ENST00000535375	MARCH4	Q9P2E8	410 aa	Predicted RBP	4.88	□□□□□ -1.63
PRKDC-205	ENST00000535375	FBXW11	Q9UKB1	542 aa		4.88	□□□□□ -1.63
PRKDC-205	ENST00000535375	CLIC4	Q9Y696	253 aa		4.88	□□□□□ -1.63
PRKDC-205	ENST00000535375		A0A1W2PQF6	199 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	OR5K3	A6NET4	321 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375		J3KRW8	73 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	DAB1	O75553	588 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	KCNK5	O95279	499 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	TMEM11	P17152	192 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	AHR	P35869	848 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	ARCN1	P48444	511 aa	Known RBP	4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	GALC	P54803	685 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	TAS2R40	P59535	323 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	SREBF2	Q12772	1141 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	ACVR2B	Q13705	512 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	RBM39	Q14498	530 aa	Known RBP	4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	KRTCAP3	Q53RY4	240 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	ADSSL1	Q8N142	457 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	EMC1	Q8N766	993 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	CNBD1	Q8NA66	436 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	POMGNT1	Q8WZA1	660 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	ZKSCAN4	Q969J2	545 aa	Predicted RBP	4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	PHF21A	Q96BD5	680 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	EVI5L	Q96CN4	794 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	ALG14	Q96F25	216 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	STAMBPL1	Q96FJ0	436 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	SCRN2	Q96FV2	425 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	ST6GAL2	Q96JF0	529 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	NCAPG	Q9BPX3	1015 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	PDZD7	Q9H5P4	517 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	ORC3	Q9UBD5	711 aa	Predicted RBP	4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	MTMR6	Q9Y217	621 aa		4.87	□□□□□ -1.63
PRKDC-205	ENST00000535375	ANKRD66	B4E2M5	251 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	BUD23	O43709	281 aa	Known RBP	4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	GPC4	O75487	556 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	TBX18	O95935	607 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	IGHV4-39	P01824	125 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	HIST1H2AB	P04908	130 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	HIST1H2AD	P20671	130 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	LINC01547	P58512	204 aa	Predicted RBP	4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	ASPRV1	Q53RT3	343 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	CEP85L	Q5SZL2	805 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	LRIF1	Q5T3J3	769 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	NCEH1	Q6PIU2	408 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	HIST3H2A	Q7L7L0	130 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	CCDC190	Q86UF4	302 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	EPHX4	Q8IUS5	362 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	HACE1	Q8IYU2	909 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	TMTC2	Q8N394	836 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	ZNF354B	Q96LW1	612 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	HCFC1R1	Q9NWW0	138 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	AASS	Q9UDR5	926 aa		4.86	□□□□□ -1.63
PRKDC-205	ENST00000535375	LIPT2	A6NK58	231 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	ERVV-2	B6SEH9	535 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	EPB41L2	O43491	1005 aa	Known RBP	4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	RNASEH2A	O75792	299 aa	Known RBP	4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	DDX58	O95786	925 aa	Known RBP	4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	ICAM1	P05362	532 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	CDH2	P19022	906 aa	Predicted RBP	4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	CHM	P24386	653 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	RPL24	P83731	157 aa	Known RBP	4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	MPP1	Q00013	466 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	MRGPRG-AS1	Q2M3A8	158 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	SOWAHC	Q53LP3	525 aa	Predicted RBP	4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	NSUN5P2	Q63ZY6	315 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	SLC35E4	Q6ICL7	350 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	LCN10	Q6JVE6	187 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	KRTAP5-11	Q6L8G4	156 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	ADAM5	Q6NVV9	412 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	SLC27A1	Q6PCB7	646 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	GLDN	Q6ZMI3	551 aa	Predicted RBP	4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	KLHDC8B	Q8IXV7	354 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	SLC5A8	Q8N695	610 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	MOAP1	Q96BY2	351 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	ABHD8	Q96I13	439 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	C1orf74	Q96LT6	269 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	NUDCD1	Q96RS6	583 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	SH2D4A	Q9H788	454 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	EPB41L5	Q9HCM4	733 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	OLA1	Q9NTK5	396 aa	Known RBP	4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	GAB2	Q9UQC2	676 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	PRAG1	Q86YV5	1406 aa		4.85	□□□□□ -1.63
PRKDC-205	ENST00000535375	CTAGE9	A4FU28	777 aa		4.84	□□□□□ -1.63
PRKDC-205	ENST00000535375		B4E171	279 aa		4.84	□□□□□ -1.63
PRKDC-205	ENST00000535375	TMEM178B	H3BS89	294 aa		4.84	□□□□□ -1.63
PRKDC-205	ENST00000535375	MAP2K7	O14733	419 aa		4.84	□□□□□ -1.63
PRKDC-205	ENST00000535375	SCAMP1	O15126	338 aa		4.84	□□□□□ -1.63
PRKDC-205	ENST00000535375	MBD4	O95243	580 aa		4.84	□□□□□ -1.63
PRKDC-205	ENST00000535375	CTAGE8	P0CG41	777 aa		4.84	□□□□□ -1.63
PRKDC-205	ENST00000535375	CSF2RA	P15509	400 aa		4.84	□□□□□ -1.63
PRKDC-205	ENST00000535375	PAX1	P15863	534 aa		4.84	□□□□□ -1.63
PRKDC-205	ENST00000535375	GM2A	P17900	193 aa		4.84	□□□□□ -1.63
PRKDC-205	ENST00000535375	MAN1A1	P33908	653 aa		4.84	□□□□□ -1.63
PRKDC-205	ENST00000535375	TIMP3	P35625	211 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms