RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 MARVELD3Q96A59 401 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 KIAA1191Q96A73 305 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 SPATA33Q96N06 139 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 ZNF641Q96N77 438 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 ZNF382Q96SR6 550 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 SEPT5Q99719 369 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 GPR88Q9GZN0 384 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 C6orf62Q9GZU0 229 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 CNOT2Q9NZN8 540 aaKnown RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 ADAMTS6Q9UKP5 1117 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 NUP50Q9UKX7 468 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 INVSQ9Y283 1065 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 SLC9A8Q9Y2E8 581 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 POFUT2Q9Y2G5 429 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 A0A1B0GVI7 797 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 FAM240BA0A1B0GVZ2 78 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 ATP6AP2A0A1C7CYW4 349 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 ACOT8O14734 319 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 MSCO60682 206 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 RPP40O75818 363 aaKnown RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 SLC4A1P02730 911 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 CYP2B6P20813 491 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 UBA1P22314 1058 aaKnown RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 XPAP23025 273 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 PTPN3P26045 913 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 DNAJA1P31689 397 aaKnown RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 TGFBR2P37173 567 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 RGS7P49802 495 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 POLR2JP52435 117 aaKnown RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 NRG1Q02297 640 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 CD47Q08722 323 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 POLD3Q15054 466 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 KLHL22Q53GT1 634 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 TPRG1LQ5T0D9 272 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 AADACL2Q6P093 401 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 SLITRK4Q8IW52 837 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 RIPOR3Q96MK2 946 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 GLT1D1Q96MS3 346 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 RPRD1AQ96P16 312 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 IL12RB2Q99665 862 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 TINF2Q9BSI4 451 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 THG1LQ9NWX6 298 aaKnown RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 H2AFY2Q9P0M6 372 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 OR12D3Q9UGF7 316 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 AJAP1Q9UKB5 411 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 IFT172Q9UG01 1749 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 PIPSLA2A3N6 862 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 B8ZZF3 427 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 TNFRSF21O75509 655 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 HMGN1P05114 100 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 PSMB4P28070 264 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 CDC25CP30307 473 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 TCF7P36402 384 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 ATP12AP54707 1039 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 NRF1Q16656 503 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 DOK7Q18PE1 504 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 OFCC1Q8IZS5 231 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 LILRB4Q8NHJ6 448 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 LRRC15Q8TF66 581 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 TBC1D20Q96BZ9 403 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 L3HYPDHQ96EM0 354 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 MED30Q96HR3 178 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 PKP2Q99959 881 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 ABCB10Q9NRK6 738 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 ZSCAN32Q9NX65 697 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 GPN3Q9UHW5 284 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 ST3GAL5Q9UNP4 418 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 LYVE1Q9Y5Y7 322 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 IGKV6-21A0A0C4DH24 114 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 A0A1W2PRG6 482 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 HMX3A6NHT5 357 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 CYB561D2O14569 222 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 EEDO75530 441 aaKnown RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 MICAL2O94851 1124 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 SLITRK5O94991 958 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 LDOC1O95751 146 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 CD48P09326 243 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 CKMT1AP12532 417 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 MAGEA3P43357 314 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 CLCQ05315 142 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 USP4Q13107 963 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 MAB21L1Q13394 359 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 CDH18Q13634 790 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 FASTKD3Q14CZ7 662 aaKnown RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 DLG2Q15700 870 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 CCDC142Q17RM4 750 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 PERM1Q5SV97 790 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 C1orf220Q5T0J3 134 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 CCDC81Q6ZN84 652 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 UMODL1-AS1Q8N2C9 162 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 RNF148Q8N7C7 305 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 FAR1Q8WVX9 515 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 NELL1Q92832 810 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 CIDECQ96AQ7 238 aaPredicted RBP4.02□□□□□ -1.77
SOX6-217ENST00000533870 RNFT2Q96EX2 444 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 PWWP2AQ96N64 755 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 SEPHS2Q99611 448 aa4.02□□□□□ -1.77
SOX6-217ENST00000533870 EFCAB11Q9BUY7 163 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms