RNA–Protein interactions for RNA: ENST00000533619.5

FGFR1-239, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 4

Gene FGFR1, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-239ENST00000533619 ARL10Q8N8L6 244 aa16.92■□□□□ 0.3
FGFR1-239ENST00000533619 OR6C4Q8NGE1 309 aa16.92■□□□□ 0.3
FGFR1-239ENST00000533619 PTCD2Q8WV60 388 aaKnown RBP16.92■□□□□ 0.3
FGFR1-239ENST00000533619 CPT1BQ92523 772 aa16.92■□□□□ 0.3
FGFR1-239ENST00000533619 ZNF514Q96K75 400 aaPredicted RBP16.92■□□□□ 0.3
FGFR1-239ENST00000533619 C16orf45Q96MC5 204 aaPredicted RBP16.92■□□□□ 0.3
FGFR1-239ENST00000533619 DPEP2Q9H4A9 486 aa16.92■□□□□ 0.3
FGFR1-239ENST00000533619 XAB2Q9HCS7 855 aaKnown RBP16.92■□□□□ 0.3
FGFR1-239ENST00000533619 ARFGAP3Q9NP61 516 aa16.92■□□□□ 0.3
FGFR1-239ENST00000533619 ASIC3Q9UHC3 531 aa16.92■□□□□ 0.3
FGFR1-239ENST00000533619 CRLS1Q9UJA2 301 aa16.92■□□□□ 0.3
FGFR1-239ENST00000533619 TCAF1Q9Y4C2 921 aa16.92■□□□□ 0.3
FGFR1-239ENST00000533619 KMOO15229 486 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 KCNJ13O60928 360 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 RFPL3O75679 317 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 DKK1O94907 266 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 GP1BAP07359 652 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 RALBP11234 206 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 MSH3P20585 1137 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 PTGIRP43119 386 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 ACADVLP49748 655 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 E2F1Q01094 437 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 DR1Q01658 176 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 CACNG1Q06432 222 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 DNAJC3Q13217 504 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 DHX34Q14147 1143 aaKnown RBP16.91■□□□□ 0.3
FGFR1-239ENST00000533619 TCEA2Q15560 299 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 CCDC38Q502W7 563 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 ZNF648Q5T619 568 aaPredicted RBP16.91■□□□□ 0.3
FGFR1-239ENST00000533619 TSTD2Q5T7W7 516 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 CHST15Q7LFX5 561 aaPredicted RBP16.91■□□□□ 0.3
FGFR1-239ENST00000533619 LRRTM4Q86VH4 590 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 NRROSQ86YC3 692 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 PPIL6Q8IXY8 311 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 CCL4L1Q8NHW4 92 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 ADAMTS14Q8WXS8 1223 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 NAT6Q93015 286 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 TOR4AQ9NXH8 423 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 TAAR2Q9P1P5 351 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 GULP1Q9UBP9 304 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 DNMT3AQ9Y6K1 912 aaPredicted RBP16.91■□□□□ 0.3
FGFR1-239ENST00000533619 PLXNB3Q9ULL4 1909 aa16.91■□□□□ 0.3
FGFR1-239ENST00000533619 CACNA1AO00555 2505 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 TCRBV7S3A2A0A539 114 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 MAGEB16A2A368 324 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 EME2A4GXA9 379 aaPredicted RBP16.9■□□□□ 0.3
FGFR1-239ENST00000533619 CFAP99D6REC4 459 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 VCLP18206 1134 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 AK4P27144 223 aaPredicted RBP16.9■□□□□ 0.3
FGFR1-239ENST00000533619 AKT1P31749 480 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 ACTR1BP42025 376 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 CLCNKAP51800 687 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 TERF1P54274 439 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 ACTR1AP61163 376 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 ACVR1Q04771 509 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 ZRANB3Q5FWF4 1079 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 SLC30A9Q6PML9 568 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 SLC35F3Q8IY50 421 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 NXPE1Q8N323 547 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 GPR156Q8NFN8 814 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 DCUN1D1Q96GG9 259 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 TTC1Q99614 292 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.9■□□□□ 0.3
FGFR1-239ENST00000533619 PADI4Q9UM07 663 aa16.9■□□□□ 0.3
FGFR1-239ENST00000533619 TRBV5-4A0A0C4DH59 114 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 CPED1A4D0V7 1026 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 KLHL33A6NCF5 533 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 SMAPO00193 183 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 MTX2O75431 263 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 PRAMEP78395 509 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 KHDC1Q4VXA5 237 aaKnown RBP16.89■□□□□ 0.29
FGFR1-239ENST00000533619 CCDC157Q569K6 752 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 TAS2R42Q7RTR8 314 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 TRAPPC5Q8IUR0 188 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 PNPLA1Q8N8W4 532 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 NAT8LQ8N9F0 302 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 SPATA4Q8NEY3 305 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 ZDHHC1Q8WTX9 485 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.89■□□□□ 0.29
FGFR1-239ENST00000533619 SGSM3Q96HU1 749 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 COPS8Q99627 209 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 TIMM29Q9BSF4 260 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 MRM3Q9HC36 420 aaKnown RBP16.89■□□□□ 0.29
FGFR1-239ENST00000533619 CHRAC1Q9NRG0 131 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 SPATS2LQ9NUQ6 558 aaKnown RBP16.89■□□□□ 0.29
FGFR1-239ENST00000533619 ZDHHC3Q9NYG2 299 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 SIRPGQ9P1W8 387 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 PRKAB1Q9Y478 270 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 PLEKHM1Q9Y4G2 1056 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 SPTBN2O15020 2390 aa16.89■□□□□ 0.29
FGFR1-239ENST00000533619 LY6G6EA0A0G2JKS1 128 aa16.88■□□□□ 0.29
FGFR1-239ENST00000533619 SDR42E2A6NKP2 422 aa16.88■□□□□ 0.29
FGFR1-239ENST00000533619 CCL22O00626 93 aa16.88■□□□□ 0.29
FGFR1-239ENST00000533619 DNALI1O14645 258 aaPredicted RBP16.88■□□□□ 0.29
FGFR1-239ENST00000533619 NDC80O14777 642 aa16.88■□□□□ 0.29
FGFR1-239ENST00000533619 ACP5P13686 325 aa16.88■□□□□ 0.29
FGFR1-239ENST00000533619 SLC2A4P14672 509 aa16.88■□□□□ 0.29
FGFR1-239ENST00000533619 ZNF7P17097 686 aaPredicted RBP16.88■□□□□ 0.29
FGFR1-239ENST00000533619 MGAT1P26572 445 aa16.88■□□□□ 0.29
FGFR1-239ENST00000533619 PPARGP37231 505 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms