RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 SUSD3Q96L08 255 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 SPATA5L1Q9BVQ7 753 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 NUAK2Q9H093 628 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 STMN3Q9NZ72 180 aa17.44■□□□□ 0.38
PHRF1-205ENST00000533464 ARFGEF2Q9Y6D5 1785 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 OR51F1A6NGY5 319 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 PPIBP23284 216 aaKnown RBP17.43■□□□□ 0.38
PHRF1-205ENST00000533464 PTGER3P43115 390 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 KLHL1Q9NR64 748 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 CIDEBQ9UHD4 219 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 PIP5K1BO14986 540 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 POP4O95707 220 aaKnown RBP17.43■□□□□ 0.38
PHRF1-205ENST00000533464 FGF19O95750 216 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 F2P00734 622 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 CAPN1P07384 714 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 OGNP20774 298 aaKnown RBP17.43■□□□□ 0.38
PHRF1-205ENST00000533464 ZNF792Q3KQV3 632 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 PDZK1Q5T2W1 519 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 FBXL22Q6P050 247 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 C2orf73Q8N5S3 287 aaPredicted RBP17.43■□□□□ 0.38
PHRF1-205ENST00000533464 REXO4Q9GZR2 422 aaKnown RBP17.43■□□□□ 0.38
PHRF1-205ENST00000533464 CHD2O14647 1828 aaKnown RBP17.43■□□□□ 0.38
PHRF1-205ENST00000533464 PNMA8CA0A1B0GUJ8 204 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 A0A1W2PQ67 120 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 F7P08709 466 aaPredicted RBP17.43■□□□□ 0.38
PHRF1-205ENST00000533464 HCAR3P49019 387 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 SPIBQ01892 262 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 CCDC92Q53HC0 331 aaPredicted RBP17.43■□□□□ 0.38
PHRF1-205ENST00000533464 KBTBD2Q8IY47 623 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 OR13C4Q8NGS5 318 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 C2orf15Q8WU43 125 aaKnown RBP17.43■□□□□ 0.38
PHRF1-205ENST00000533464 TLE6Q9H808 572 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 MIOSQ9NXC5 875 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 ATP6V1HQ9UI12 483 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 FADS3Q9Y5Q0 445 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 CCDC162PA2VCL2 907 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 MGRN1O60291 552 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 GTF2E2P29084 291 aaKnown RBP17.43■□□□□ 0.38
PHRF1-205ENST00000533464 PRDX6P30041 224 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 LIPEQ05469 1076 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 RFX4Q33E94 735 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 SLC9A4Q6AI14 798 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 REP15Q6BDI9 236 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 ARMC8Q8IUR7 673 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 OR4A15Q8NGL6 344 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 HMG20AQ9NP66 347 aa17.43■□□□□ 0.38
PHRF1-205ENST00000533464 KPNA4O00629 521 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-205ENST00000533464 CYP4F2P78329 520 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 GTF2H2Q13888 395 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 CBX2Q14781 532 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-205ENST00000533464 TAF1AQ15573 450 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-205ENST00000533464 CDC73Q6P1J9 531 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 GTF2H2CQ6P1K8 395 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 SAPCD2Q86UD0 394 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 FAM156AQ8NDB6 213 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 PNPT1Q8TCS8 783 aaKnown RBP17.42■□□□□ 0.38
PHRF1-205ENST00000533464 FEM1CQ96JP0 617 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 GKN1Q9NS71 199 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 TEX264Q9Y6I9 313 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 G3V2T6 193 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 GABRDO14764 452 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 FANCGO15287 622 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 MT-ND1P03886 318 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 CYP4B1P13584 511 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 TRIM25Q14258 630 aaKnown RBP17.42■□□□□ 0.38
PHRF1-205ENST00000533464 GRB14Q14449 540 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 PLA2G4EQ3MJ16 856 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 MACC1Q6ZN28 852 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 C7orf43Q8WVR3 580 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 GNEQ9Y223 722 aaKnown RBP17.42■□□□□ 0.38
PHRF1-205ENST00000533464 SLC45A1Q9Y2W3 748 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 FAM159BA6NKW6 160 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 OR10H3O60404 316 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 FAM163BP0C2L3 166 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 PSMA3P25788 255 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 MANFP55145 182 aaKnown RBP17.42■□□□□ 0.38
PHRF1-205ENST00000533464 TMEM63BQ5T3F8 832 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 GPR107Q5VW38 600 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 CTU1Q7Z7A3 348 aaKnown RBP17.42■□□□□ 0.38
PHRF1-205ENST00000533464 HEATR4Q86WZ0 1026 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 UBR7Q8N806 425 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 POP5Q969H6 163 aaKnown RBP17.42■□□□□ 0.38
PHRF1-205ENST00000533464 ARHGEF3Q9NR81 526 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 Q9Y3F1 56 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 TBC1D3DA0A087WVF3 549 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 TBC1D3IA0A087WXS9 549 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 TBC1D3EA0A087X179 549 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 TBC1D3KA0A087X1G2 549 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 TBC1D3FA6NER0 549 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-205ENST00000533464 TBC1D3LB9A6J9 549 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 TBC1D3HP0C7X1 549 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 ETS2P15036 469 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 ADARP55265 1226 aaKnown RBP17.42■□□□□ 0.38
PHRF1-205ENST00000533464 DPYSQ14117 519 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 PRKD1Q15139 912 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-205ENST00000533464 TBC1D3GQ6DHY5 549 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 TBC1D3CQ6IPX1 549 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 CHSY3Q70JA7 882 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 RGL4Q8IZJ4 473 aa17.42■□□□□ 0.38
PHRF1-205ENST00000533464 TBC1D3Q8IZP1 549 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms