RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 GLRBP48167 497 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 CDKN1CP49918 316 aaPredicted RBP18.34■□□□□ 0.53
SMPD1-208ENST00000533123 MTAPQ13126 283 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 SPRED3Q2MJR0 410 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 TMEM52BQ4KMG9 183 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 TMEM31Q5JXX7 168 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 C10orf107Q8IVU9 208 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 CENPLQ8N0S6 344 aaPredicted RBP18.34■□□□□ 0.53
SMPD1-208ENST00000533123 TSTD1Q8NFU3 115 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 GABPB2Q8TAK5 448 aaPredicted RBP18.34■□□□□ 0.53
SMPD1-208ENST00000533123 C20orf27Q9GZN8 174 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 CATSPERZQ9NTU4 200 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 ABCF3Q9NUQ8 709 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 PKD2L2Q9NZM6 624 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 PRR23AA6NEV1 266 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 GAPDHSO14556 408 aaPredicted RBP18.34■□□□□ 0.53
SMPD1-208ENST00000533123 HGSO14964 777 aaPredicted RBP18.34■□□□□ 0.53
SMPD1-208ENST00000533123 PRAMEF1O95521 474 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 GM2AP17900 193 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 SPAM1P38567 509 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 TPMTP51580 245 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 AFTPHQ6ULP2 937 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 CXorf40AQ8TE69 158 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 SCAMP4Q969E2 229 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 FAM131CQ96AQ9 280 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 NMRAL1Q9HBL8 299 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 CPSF2Q9P2I0 782 aaKnown RBP18.34■□□□□ 0.53
SMPD1-208ENST00000533123 COPG2Q9UBF2 871 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 EBF1Q9UH73 591 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 NCKAP1Q9Y2A7 1128 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 ANKRD6Q9Y2G4 727 aa18.34■□□□□ 0.53
SMPD1-208ENST00000533123 DOCK9Q9BZ29 2069 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 GLYATL1P3A0A0U1RQE8 302 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 DCXO43602 365 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 PI15O43692 258 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 AP1G1O43747 822 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 SRP72O76094 671 aaKnown RBP18.33■□□□□ 0.53
SMPD1-208ENST00000533123 FGF3P11487 239 aaPredicted RBP18.33■□□□□ 0.53
SMPD1-208ENST00000533123 C6P13671 934 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 RPS9P46781 194 aaKnown RBP18.33■□□□□ 0.53
SMPD1-208ENST00000533123 CLCN5P51795 746 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 POU4F1Q01851 419 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 DLG1Q12959 904 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 CCDC153Q494R4 210 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 ZRANB3Q5FWF4 1079 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 USP30Q70CQ3 517 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 SPEM1Q8N4L4 309 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 RFWD2Q8NHY2 731 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 C19orf43Q9BQ61 176 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 ACOT9Q9Y305 439 aa18.33■□□□□ 0.53
SMPD1-208ENST00000533123 CCT8L1PA6NM43 557 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 TK2O00142 265 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 TSPAN6O43657 245 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 PLRG1O43660 514 aaKnown RBP18.33■□□□□ 0.52
SMPD1-208ENST00000533123 UGT1A6P19224 532 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 UGT1A1P22309 533 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 UGT1A4P22310 534 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 UGT1A3P35503 534 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 UGT1A5P35504 534 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 POLD2P49005 469 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 MNAT1P51948 309 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 ADPRHP54922 357 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 CDKN2DP55273 166 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 CHRNA6Q15825 494 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 HECTD2Q5U5R9 776 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 MRNIPQ6NTE8 343 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 PSAPL1Q6NUJ1 521 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 TECPR1Q7Z6L1 1165 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 GALNT7Q86SF2 657 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 KBTBD6Q86V97 674 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 TRIM42Q8IWZ5 723 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 PIANPQ8IYJ0 282 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 GPR150Q8NGU9 434 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 CCT6BQ92526 530 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 DCTN4Q9UJW0 460 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 APPL1Q9UKG1 709 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 SLC30A1Q9Y6M5 507 aa18.33■□□□□ 0.52
SMPD1-208ENST00000533123 ZDBF2Q9HCK1 2354 aa18.32■□□□□ 0.52
SMPD1-208ENST00000533123 PSMD11O00231 422 aa18.32■□□□□ 0.52
SMPD1-208ENST00000533123 LZTS3O60299 673 aaPredicted RBP18.32■□□□□ 0.52
SMPD1-208ENST00000533123 RECQL5O94762 991 aaPredicted RBP18.32■□□□□ 0.52
SMPD1-208ENST00000533123 CPA3P15088 417 aa18.32■□□□□ 0.52
SMPD1-208ENST00000533123 SLC12A2P55011 1212 aa18.32■□□□□ 0.52
SMPD1-208ENST00000533123 SEL1L3Q68CR1 1132 aa18.32■□□□□ 0.52
SMPD1-208ENST00000533123 CWF19L1Q69YN2 538 aaKnown RBP18.32■□□□□ 0.52
SMPD1-208ENST00000533123 PIM3Q86V86 326 aa18.32■□□□□ 0.52
SMPD1-208ENST00000533123 LMNTD2Q8IXW0 634 aa18.32■□□□□ 0.52
SMPD1-208ENST00000533123 C10orf82Q8WW14 230 aa18.32■□□□□ 0.52
SMPD1-208ENST00000533123 COQ10AQ96MF6 247 aa18.32■□□□□ 0.52
SMPD1-208ENST00000533123 PLEKHG4BQ96PX9 1271 aa18.32■□□□□ 0.52
SMPD1-208ENST00000533123 FAM83DQ9H4H8 585 aa18.32■□□□□ 0.52
SMPD1-208ENST00000533123 ASB8Q9H765 288 aa18.32■□□□□ 0.52
SMPD1-208ENST00000533123 ITM2CQ9NQX7 267 aa18.32■□□□□ 0.52
SMPD1-208ENST00000533123 KLHL14Q9P2G3 628 aa18.32■□□□□ 0.52
SMPD1-208ENST00000533123 FZD4Q9ULV1 537 aa18.32■□□□□ 0.52
SMPD1-208ENST00000533123 RUVBL2Q9Y230 463 aaKnown RBP18.32■□□□□ 0.52
SMPD1-208ENST00000533123 IGLON5A6NGN9 336 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 G3V2L1 256 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 WNT9AO14904 365 aa18.31■□□□□ 0.52
SMPD1-208ENST00000533123 CRABP2P29373 138 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms