RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 RHOT1Q8IXI2 618 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 CACNA2D3Q8IZS8 1091 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 TRIB3Q96RU7 358 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 CTRCQ99895 268 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 MAGEE1Q9HCI5 957 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 TRIM39Q9HCM9 518 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 RAD18Q9NS91 495 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 DDX56Q9NY93 547 aaKnown RBP17.6■□□□□ 0.41
PCF11-206ENST00000533018 UBP1Q9NZI7 540 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 CPNE7Q9UBL6 633 aa17.6■□□□□ 0.41
PCF11-206ENST00000533018 TLN1Q9Y490 2541 aaKnown RBP17.59■□□□□ 0.41
PCF11-206ENST00000533018 A0A0A6YYK5 440 aaPredicted RBP17.59■□□□□ 0.41
PCF11-206ENST00000533018 OR5K4A6NMS3 321 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 MFAP3LO75121 409 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 MTX2O75431 263 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 SLC1A1P43005 524 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 LLGL1Q15334 1064 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 SEPT7Q16181 437 aaKnown RBP17.59■□□□□ 0.41
PCF11-206ENST00000533018 TEX44Q53QW1 395 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 LRRC38Q5VT99 294 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 BZW1Q7L1Q6 419 aaKnown RBP17.59■□□□□ 0.41
PCF11-206ENST00000533018 TMC3Q7Z5M5 1100 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 ADGRG6Q86SQ4 1221 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 VSTM4Q8IW00 320 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 TRIM48Q8IWZ4 208 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 TRAM1L1Q8N609 369 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 GLYATL1Q969I3 302 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 TBC1D10AQ9BXI6 508 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 GLOD4Q9HC38 313 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 SAE1Q9UBE0 346 aaPredicted RBP17.59■□□□□ 0.41
PCF11-206ENST00000533018 DNAJC16Q9Y2G8 782 aa17.59■□□□□ 0.41
PCF11-206ENST00000533018 PDZK1P1A8MUH7 402 aa17.58■□□□□ 0.4
PCF11-206ENST00000533018 KMOO15229 486 aa17.58■□□□□ 0.4
PCF11-206ENST00000533018 RAD1O60671 282 aa17.58■□□□□ 0.4
PCF11-206ENST00000533018 SFTPCP11686 197 aa17.58■□□□□ 0.4
PCF11-206ENST00000533018 LIFP15018 202 aa17.58■□□□□ 0.4
PCF11-206ENST00000533018 COMTP21964 271 aa17.58■□□□□ 0.4
PCF11-206ENST00000533018 TNNT3P45378 269 aaPredicted RBP17.58■□□□□ 0.4
PCF11-206ENST00000533018 NOP2P46087 812 aaKnown RBP17.58■□□□□ 0.4
PCF11-206ENST00000533018 EPHA4P54764 986 aa17.58■□□□□ 0.4
PCF11-206ENST00000533018 DCDC1P59894 354 aa17.58■□□□□ 0.4
PCF11-206ENST00000533018 SKOR2Q2VWA4 1001 aaPredicted RBP17.58■□□□□ 0.4
PCF11-206ENST00000533018 MFSD7Q6UXD7 560 aa17.58■□□□□ 0.4
PCF11-206ENST00000533018 AVL9Q8NBF6 648 aa17.58■□□□□ 0.4
PCF11-206ENST00000533018 GDAP1Q8TB36 358 aa17.58■□□□□ 0.4
PCF11-206ENST00000533018 HTR3CQ8WXA8 447 aa17.58■□□□□ 0.4
PCF11-206ENST00000533018 OLFM3Q96PB7 478 aa17.58■□□□□ 0.4
PCF11-206ENST00000533018 TEFMQ96QE5 360 aaKnown RBP17.58■□□□□ 0.4
PCF11-206ENST00000533018 BPIFA1Q9NP55 256 aa17.58■□□□□ 0.4
PCF11-206ENST00000533018 PDP2Q9P2J9 529 aa17.58■□□□□ 0.4
PCF11-206ENST00000533018 A6NCN8 305 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 GPR89AB7ZAQ6 455 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 CDK14O94921 469 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 NDST3O95803 873 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 VIPP01282 170 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 GPR89BP0CG08 455 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 BPIP17213 487 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 AMD1P17707 334 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 PTPN3P26045 913 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 MC2RQ01718 297 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 TFDP2Q14188 446 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 PDPK2PQ6A1A2 396 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 CEACAM20Q6UY09 585 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 ARHGAP22Q7Z5H3 698 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 LRRTM4Q86VH4 590 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 PLXDC1Q8IUK5 500 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 BMPERQ8N8U9 685 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 RNF214Q8ND24 703 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 TFB1MQ8WVM0 346 aaKnown RBP17.57■□□□□ 0.4
PCF11-206ENST00000533018 KIAA1143Q96AT1 154 aaPredicted RBP17.57■□□□□ 0.4
PCF11-206ENST00000533018 RTP4Q96DX8 246 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 PLEKHG4BQ96PX9 1271 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 SRPK1Q96SB4 655 aaKnown RBP17.57■□□□□ 0.4
PCF11-206ENST00000533018 EPB41L1Q9H4G0 881 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 SLC23A2Q9UGH3 650 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 BSNQ9UPA5 3926 aa17.57■□□□□ 0.4
PCF11-206ENST00000533018 MYO18BQ8IUG5 2567 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 F5H423 210 aaPredicted RBP17.56■□□□□ 0.4
PCF11-206ENST00000533018 AURKAO14965 403 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 CST8O60676 142 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 ZNF7P17097 686 aaPredicted RBP17.56■□□□□ 0.4
PCF11-206ENST00000533018 TYRP1P17643 537 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 RPL10P27635 214 aaKnown RBP17.56■□□□□ 0.4
PCF11-206ENST00000533018 NR2C2P49116 596 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 NFKB2Q00653 900 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 CNGA4Q8IV77 575 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 NLGN4XQ8N0W4 816 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 NLGN4YQ8NFZ3 816 aaPredicted RBP17.56■□□□□ 0.4
PCF11-206ENST00000533018 TEKT5Q96M29 485 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 TTC25Q96NG3 672 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 ZPBPQ9BS86 351 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 SLC12A9Q9BXP2 914 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 TSPY26PQ9H489 355 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 SCHIP1Q9P0W5 487 aaPredicted RBP17.56■□□□□ 0.4
PCF11-206ENST00000533018 TRIM10Q9UDY6 481 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 PILRAQ9UKJ1 303 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 SPO11Q9Y5K1 396 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 ADGRG1Q9Y653 693 aa17.56■□□□□ 0.4
PCF11-206ENST00000533018 AKR1B15C9JRZ8 316 aaPredicted RBP17.55■□□□□ 0.4
PCF11-206ENST00000533018 CHUKO15111 745 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 195.8 ms