RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 ACRV1P26436 265 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 AKT1P31749 480 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 GNPDA1P46926 289 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 CDKN1CP49918 316 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 CCT8P50990 548 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 SLC14A1Q13336 389 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 CUL1Q13616 776 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 THOC5Q13769 683 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 HLTFQ14527 1009 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 AARS2Q5JTZ9 985 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 SPANXN3Q5MJ09 141 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 TEX35Q5T0J7 233 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 ZNF648Q5T619 568 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 KIAA0930Q6ICG6 404 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 MRNIPQ6NTE8 343 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 CERS6Q6ZMG9 384 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 CEP128Q6ZU80 1094 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 MARK2Q7KZI7 788 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 ADGRG6Q86SQ4 1221 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 IGDCC3Q8IVU1 814 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 PALM2Q8IXS6 379 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 KIAA2013Q8IYS2 634 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 ZBED8Q8IZ13 594 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 NXPE1Q8N323 547 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 LRRN4CLQ8ND94 238 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 OR2I1PQ8NGU4 316 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 PYROXD1Q8WU10 500 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 ANKRD7Q92527 254 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 SCARF2Q96GP6 870 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 COPS8Q99627 209 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 PHACTR1Q9C0D0 580 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 TSPYL1Q9H0U9 437 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 OR2AG1Q9H205 316 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 CARS2Q9HA77 564 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 SAYSD1Q9NPB0 183 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 RXFP3Q9NSD7 469 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 CATSPERZQ9NTU4 200 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 C20orf96Q9NUD7 363 aaPredicted RBP11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 ZDHHC3Q9NYG2 299 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 SPASTQ9UBP0 616 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 APOBEC3BQ9UH17 382 aaKnown RBP11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 SUFUQ9UMX1 484 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 GPSM3Q9Y4H4 160 aa11.12□□□□□ -0.63
TRAPPC4-211ENST00000533012 TRBV5-4A0A0C4DH59 114 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 ZCWPW2A0A1B0GU75 182 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 NEMP2A6NFY4 417 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 C4orf47A7E2U8 309 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 GRID2O43424 1007 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 NUAK1O60285 661 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 MTX2O75431 263 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 FUCA1P04066 466 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 PRSS56P0CW18 603 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 ZNF8P17098 575 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 MCM3P25205 808 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 PMLP29590 882 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 FOXN2P32314 431 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 CA5AP35218 305 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 PLA2G5P39877 138 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 ARCN1P48444 511 aaKnown RBP11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 CARSP49589 748 aaKnown RBP11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 ARHGAP8P85298 464 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 IL9RQ01113 521 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 BNIP3Q12983 259 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 ELOCQ15369 112 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 SHBQ15464 509 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 LONRF1Q17RB8 773 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 UAP1L1Q3KQV9 507 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 PRRT3Q5FWE3 981 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 PSAPL1Q6NUJ1 521 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 NEPROQ6NW34 567 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 ALYREFQ86V81 257 aaKnown RBP11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 CCDC25Q86WR0 208 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 GALNT13Q8IUC8 556 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 ANKMY2Q8IV38 441 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 PIANPQ8IYJ0 282 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 OTUD6BQ8N6M0 293 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 FBXO36Q8NEA4 188 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 GABPB2Q8TAK5 448 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 LMX1AQ8TE12 382 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 CFAP36Q96G28 342 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 PDXPQ96GD0 296 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 ZNF514Q96K75 400 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 TRIM56Q9BRZ2 755 aaKnown RBP11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 ZDHHC18Q9NUE0 388 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 TRNAU1APQ9NX07 287 aaKnown RBP11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 PNMA8BQ9ULN7 279 aaPredicted RBP11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 GPR34Q9UPC5 381 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 CHMP2BQ9UQN3 213 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 PCDHGB2Q9Y5G2 931 aa11.11□□□□□ -0.63
TRAPPC4-211ENST00000533012 TNRC6BQ9UPQ9 1833 aaKnown RBP11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 GOLGA8KD6RF30 607 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 GOLGA8TH3BQL2 631 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 CHUKO15111 745 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 SCAMP1O15126 338 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 KMOO15229 486 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 AQP9O43315 295 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 PCDHGA12O60330 932 aa11.1□□□□□ -0.63
TRAPPC4-211ENST00000533012 GDF9O60383 454 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms