RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 SQLEQ14534 574 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 SEMA3AQ14563 771 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 NAA25Q14CX7 972 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 SMAD1Q15797 465 aaKnown RBP12.17□□□□□ -0.46
CHD7-211ENST00000532149 DUSP6Q16828 381 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 SMU1Q2TAY7 513 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 FUT11Q495W5 492 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 SPATS1Q496A3 300 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 LY6G5CQ5SRR4 150 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 PSAPL1Q6NUJ1 521 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 TMEM207Q6UWW9 146 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 TMEM184AQ6ZMB5 413 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 NEK10Q6ZWH5 1172 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 GRASPQ7Z6J2 395 aaPredicted RBP12.17□□□□□ -0.46
CHD7-211ENST00000532149 DSG4Q86SJ6 1040 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 ADIPOR2Q86V24 386 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 NLRP8Q86W28 1048 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 SERPINA9Q86WD7 417 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 SCUBE1Q8IWY4 988 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 NXPE1Q8N323 547 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 ENDOVQ8N8Q3 282 aaKnown RBP12.17□□□□□ -0.46
CHD7-211ENST00000532149 VN1R2Q8NFZ6 395 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 OR56A4Q8NGH8 313 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 UCMAQ8WVF2 138 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 SMARCD2Q92925 531 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 STMN2Q93045 179 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 ZNF707Q96C28 371 aaPredicted RBP12.17□□□□□ -0.46
CHD7-211ENST00000532149 NSMCE3Q96MG7 304 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 COPS8Q99627 209 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 C17orf80Q9BSJ5 609 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 CADM1Q9BY67 442 aaKnown RBP12.17□□□□□ -0.46
CHD7-211ENST00000532149 FAM126AQ9BYI3 521 aaPredicted RBP12.17□□□□□ -0.46
CHD7-211ENST00000532149 TRIM54Q9BYV2 358 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 GSTO2Q9H4Y5 243 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 BRD9Q9H8M2 597 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 ZNF395Q9H8N7 513 aaPredicted RBP12.17□□□□□ -0.46
CHD7-211ENST00000532149 EFCAB1Q9HAE3 211 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 IL26Q9NPH9 171 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 HCFC1R1Q9NWW0 138 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 GTSE1Q9NYZ3 720 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 ACTL7AQ9Y615 435 aa12.17□□□□□ -0.46
CHD7-211ENST00000532149 IGLV3-16A0A075B6K0 115 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 DYTNA2CJ06 578 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 PABPN1LA6NDY0 278 aaKnown RBP12.16□□□□□ -0.46
CHD7-211ENST00000532149 BBIP1A8MTZ0 92 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 K7ERQ8 282 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 HGSO14964 777 aaPredicted RBP12.16□□□□□ -0.46
CHD7-211ENST00000532149 AZIN1O14977 448 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 SLC16A5O15375 505 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 MAP3K7O43318 606 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 BUD23O43709 281 aaKnown RBP12.16□□□□□ -0.46
CHD7-211ENST00000532149 FKBP6O75344 327 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 RFPL2O75678 378 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 GJB3O75712 270 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 CHRNGP07510 517 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 EPCAMP16422 314 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 BPIP17213 487 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 VCLP18206 1134 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 MSH3P20585 1137 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 XPAP23025 273 aaPredicted RBP12.16□□□□□ -0.46
CHD7-211ENST00000532149 MPSTP25325 297 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 VIPR1P32241 457 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 GCKP35557 465 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 CLCN7P51798 805 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 CCNG1P51959 295 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 STX1BP61266 288 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 CDKL1Q00532 357 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 ELP6Q0PNE2 266 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 CAMK1Q14012 370 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 CYLC2Q14093 348 aaPredicted RBP12.16□□□□□ -0.46
CHD7-211ENST00000532149 PCBP2Q15366 365 aaKnown RBP eCLIP12.16□□□□□ -0.46
CHD7-211ENST00000532149 DHCR24Q15392 516 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 GSTA3Q16772 222 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 LSM12Q3MHD2 195 aaKnown RBP12.16□□□□□ -0.46
CHD7-211ENST00000532149 ZNF805Q5CZA5 627 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 ERAP2Q6P179 960 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 AAGABQ6PD74 315 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 CRTC1Q6UUV9 634 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 MAVSQ7Z434 540 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 SPATA19Q7Z5L4 167 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 LDB1Q86U70 411 aaPredicted RBP12.16□□□□□ -0.46
CHD7-211ENST00000532149 PIANPQ8IYJ0 282 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 PTGR2Q8N8N7 351 aaPredicted RBP12.16□□□□□ -0.46
CHD7-211ENST00000532149 FAM13CQ8NE31 585 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 TMIEQ8NEW7 156 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 CD200R1Q8TD46 325 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 BPIFB1Q8TDL5 484 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 FUBP1Q96AE4 644 aaKnown RBP12.16□□□□□ -0.46
CHD7-211ENST00000532149 PBXIP1Q96AQ6 731 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 TCEAL4Q96EI5 215 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 PPP1R16AQ96I34 528 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 ZSCAN5AQ9BUG6 496 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 MCOLN1Q9GZU1 580 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 ZBTB26Q9HCK0 441 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 PLK2Q9NYY3 685 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 NOP53Q9NZM5 478 aaKnown RBP12.16□□□□□ -0.46
CHD7-211ENST00000532149 MSRAQ9UJ68 235 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 FAM50BQ9Y247 325 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 CCL26Q9Y258 94 aa12.16□□□□□ -0.46
CHD7-211ENST00000532149 BRCA2P51587 3418 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms