RNA–Protein interactions for RNA: ENST00000531867.1

PUM1-222, Transcript of pumilio RNA binding family member 1, human

TSL 4

Gene PUM1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-222	ENST00000531867	MMS19	Q96T76	1030 aa		5.85	□□□□□ -1.47
PUM1-222	ENST00000531867	SORBS1	Q9BX66	1292 aa	Known RBP	5.85	□□□□□ -1.47
PUM1-222	ENST00000531867	BBS2	Q9BXC9	721 aa		5.85	□□□□□ -1.47
PUM1-222	ENST00000531867	TRIM9	Q9C026	710 aa		5.85	□□□□□ -1.47
PUM1-222	ENST00000531867	ERVMER34-1	Q9H9K5	563 aa		5.85	□□□□□ -1.47
PUM1-222	ENST00000531867	POLR1B	Q9H9Y6	1135 aa		5.85	□□□□□ -1.47
PUM1-222	ENST00000531867	ORC3	Q9UBD5	711 aa	Predicted RBP	5.85	□□□□□ -1.47
PUM1-222	ENST00000531867	AASS	Q9UDR5	926 aa		5.85	□□□□□ -1.47
PUM1-222	ENST00000531867	FLNC	Q14315	2725 aa		5.85	□□□□□ -1.47
PUM1-222	ENST00000531867	RELN	P78509	3460 aa		5.85	□□□□□ -1.47
PUM1-222	ENST00000531867	LRRK2	Q5S007	2527 aa		5.85	□□□□□ -1.47
PUM1-222	ENST00000531867	ICE1	Q9Y2F5	2266 aa		5.85	□□□□□ -1.47
PUM1-222	ENST00000531867		A0A1W2PNU3	283 aa	Predicted RBP	5.84	□□□□□ -1.47
PUM1-222	ENST00000531867		A0A1W2PPC4	97 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867		A0A1W2PPL8	197 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867		A0A1W2PR77	199 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	SMTNL1	A8MU46	457 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	CDRT15L2	A8MXV6	281 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	NEDD8-MDP1	E9PL57	170 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	HNRNPDL	O14979	420 aa	Known RBP	5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	HUS1	O60921	280 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	SEMA4F	O95754	770 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	PENK	P01210	267 aa	Predicted RBP	5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	ACADM	P11310	421 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	SFTPC	P11686	197 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	LMO2	P25791	158 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	MGAT1	P26572	445 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	LIG4	P49917	911 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	INHBC	P55103	352 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	SLC25A3	Q00325	362 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	TLE1	Q04724	770 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	ZBTB16	Q05516	673 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	GALNT1	Q10472	559 aa	Predicted RBP	5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	MST1L	Q2TV78	715 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	BMP2KL	Q5H9B9	411 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	PRAMEF14	Q5SWL7	426 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	HECTD3	Q5T447	861 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	KDM7A	Q6ZMT4	941 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	TXLNB	Q8N3L3	684 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	ZNF276	Q8N554	614 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	LRRC52	Q8N7C0	313 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	ZMIZ2	Q8NF64	920 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	OR2T3	Q8NH03	318 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	KBTBD7	Q8WVZ9	684 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	NEU4	Q8WWR8	484 aa	Predicted RBP	5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	WASF1	Q92558	559 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	FATE1	Q969F0	183 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	HDAC10	Q969S8	669 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	MYLPF	Q96A32	169 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	HVCN1	Q96D96	273 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	PRR11	Q96HE9	360 aa	Predicted RBP	5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	PCED1B	Q96HM7	432 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	PIWIL1	Q96J94	861 aa	Known RBP	5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	C7orf26	Q96N11	449 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	SLC46A1	Q96NT5	459 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	SLITRK1	Q96PX8	696 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	BAG1	Q99933	345 aa	Predicted RBP	5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	SYT15	Q9BQS2	421 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	NDC1	Q9BTX1	674 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	MMTAG2	Q9BU76	263 aa	Known RBP	5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	MSTO1	Q9BUK6	570 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	ACE2	Q9BYF1	805 aa	Predicted RBP	5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	EBF2	Q9HAK2	575 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	THSD1	Q9NS62	852 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	TMEM30A	Q9NV96	361 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	ARGLU1	Q9NWB6	273 aa	Predicted RBP	5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	KCND2	Q9NZV8	630 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	CDH9	Q9ULB4	789 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	SLC39A10	Q9ULF5	831 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	CACNA1D	Q01668	2161 aa		5.84	□□□□□ -1.47
PUM1-222	ENST00000531867	TLN1	Q9Y490	2541 aa	Known RBP	5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	PGPEP1L	A6NFU8	196 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867		F8VP50	259 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	HTRA2	O43464	458 aa	Predicted RBP	5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	SYNCRIP	O60506	623 aa	Known RBP	5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	PFKFB2	O60825	505 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	FAM20B	O75063	409 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	FAM200B	P0CF97	657 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	ATP1A3	P13637	1013 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	ALOX15	P16050	662 aa	Predicted RBP	5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	PRKCH	P24723	683 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	ANXA13	P27216	316 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	YWHAQ	P27348	245 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	SERPINF1	P36955	418 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	ACOT2	P49753	483 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	MAP2K6	P52564	334 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	CACNA2D1	P54289	1103 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	BCAT1	P54687	386 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	SLC12A3	P55017	1021 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	MFAP3	P55082	362 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	CDH8	P55286	799 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	C21orf59	P57076	290 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	RNASE9	P60153	205 aa	Known RBP	5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	VAMP2	P63027	116 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	GTF2B	Q00403	316 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	CDK17	Q00537	523 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	DPT	Q07507	201 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	WASHC5	Q12768	1159 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	EFR3A	Q14156	821 aa		5.83	□□□□□ -1.48
PUM1-222	ENST00000531867	ZNF234	Q14588	700 aa		5.83	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms