RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 USP9XQ93008 2570 aaPredicted RBP18.19■□□□□ 0.5
SSSCA1-206ENST00000531405 LILRA5A6NI73 299 aa18.18■□□□□ 0.5
SSSCA1-206ENST00000531405 ZNF28P17035 718 aa18.18■□□□□ 0.5
SSSCA1-206ENST00000531405 MX2P20592 715 aa18.18■□□□□ 0.5
SSSCA1-206ENST00000531405 F8A1P23610 371 aa18.18■□□□□ 0.5
SSSCA1-206ENST00000531405 PBX1P40424 430 aa18.18■□□□□ 0.5
SSSCA1-206ENST00000531405 STAT5AP42229 794 aa18.18■□□□□ 0.5
SSSCA1-206ENST00000531405 FOXM1Q08050 763 aa18.18■□□□□ 0.5
SSSCA1-206ENST00000531405 PDK2Q15119 407 aa18.18■□□□□ 0.5
SSSCA1-206ENST00000531405 CNTD1Q8N815 330 aa18.18■□□□□ 0.5
SSSCA1-206ENST00000531405 GPR26Q8NDV2 337 aa18.18■□□□□ 0.5
SSSCA1-206ENST00000531405 EFHD1Q9BUP0 239 aa18.18■□□□□ 0.5
SSSCA1-206ENST00000531405 SLC23A2Q9UGH3 650 aa18.18■□□□□ 0.5
SSSCA1-206ENST00000531405 SHOC2Q9UQ13 582 aa18.18■□□□□ 0.5
SSSCA1-206ENST00000531405 SLC30A1Q9Y6M5 507 aa18.18■□□□□ 0.5
SSSCA1-206ENST00000531405 USP9YO00507 2555 aaPredicted RBP18.18■□□□□ 0.5
SSSCA1-206ENST00000531405 RGSL1A5PLK6 1076 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 OR5K4A6NMS3 321 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 PROSCO94903 275 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 SLC25A14O95258 325 aaPredicted RBP18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 CASRP41180 1078 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 SEPHS1P49903 392 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 SEPT7Q16181 437 aaKnown RBP18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 ZNF569Q5MCW4 686 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 ZFYVE27Q5T4F4 411 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 CAVIN1Q6NZI2 390 aaKnown RBP18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 ADGRG6Q86SQ4 1221 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 PLXDC1Q8IUK5 500 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 RAPGEF5Q92565 580 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 ABHD17AQ96GS6 310 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 C9orf72Q96LT7 481 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 TGM7Q96PF1 710 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 ADGRE3Q9BY15 652 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 ULBP3Q9BZM4 244 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 TRIT1Q9H3H1 467 aaKnown RBP18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 EPB41L1Q9H4G0 881 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 ZFYVE1Q9HBF4 777 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 CTTNBP2NLQ9P2B4 639 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 DNAJC16Q9Y2G8 782 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 RPS6KL1Q9Y6S9 549 aa18.17■□□□□ 0.5
SSSCA1-206ENST00000531405 MTX2O75431 263 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 C9P02748 559 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 ANKRD34CP0C6C1 535 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 TCN2P20062 427 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 LEPRP48357 1165 aaKnown RBP18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 SH3BP2P78314 561 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 FOXK1P85037 733 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 ZBED6P86452 979 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 FANCCQ00597 558 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 INSCQ1MX18 579 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 TMEM26Q6ZUK4 368 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 MAP7D3Q8IWC1 876 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 ESX1Q8N693 406 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 APOBEC4Q8WW27 367 aaKnown RBP18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 ELMO2Q96JJ3 720 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 TRIB3Q96RU7 358 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 PACSIN1Q9BY11 444 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 TRIM39Q9HCM9 518 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 ZNF624Q9P2J8 865 aaPredicted RBP18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 ANAPC2Q9UJX6 822 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 CAPN11Q9UMQ6 739 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 NENFQ9UMX5 172 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 HEY1Q9Y5J3 304 aa18.16■□□□□ 0.5
SSSCA1-206ENST00000531405 MTA2O94776 668 aa18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 UBXN7O94888 489 aa18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 VIPP01282 170 aa18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 KRT7P08729 469 aa18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 XRCC1P18887 633 aaPredicted RBP18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 SLC19A1P41440 591 aa18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 CLCNKAP51800 687 aa18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 IFI35P80217 286 aaPredicted RBP18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 PPIDQ08752 370 aaKnown RBP18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 PCSK7Q16549 785 aa18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 TRIM48Q8IWZ4 208 aa18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 PLD5Q8N7P1 536 aa18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 AVL9Q8NBF6 648 aa18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 GALNT6Q8NCL4 622 aa18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 GLYATL1Q969I3 302 aa18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 ZNF830Q96NB3 372 aaPredicted RBP18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 RNF157Q96PX1 679 aa18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 ZSCAN5AQ9BUG6 496 aa18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 ZNF711Q9Y462 761 aa18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 SPTAN1Q13813 2472 aaKnown RBP18.15■□□□□ 0.5
SSSCA1-206ENST00000531405 PDZK1P1A8MUH7 402 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 CHUKO15111 745 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 KIF1CO43896 1103 aaKnown RBP18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 GYPCP04921 128 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 ZNF7P17097 686 aaPredicted RBP18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 AMD1P17707 334 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 NR1D1P20393 614 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 KDELR1P24390 212 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 RPL10P27635 214 aaKnown RBP18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 DLSTP36957 453 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 NOP2P46087 812 aaKnown RBP18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 DCDC1P59894 354 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 MC1RQ01726 317 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 AP1B1Q10567 949 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 UBAP2LQ14157 1087 aaKnown RBP18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 MAP7Q14244 749 aa18.14■□□□□ 0.49
SSSCA1-206ENST00000531405 KHDC1Q4VXA5 237 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms