RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ITLN2Q8WWU7 325 aaPredicted RBP8.11□□□□□ -1.11
CD44-232ENST00000531118 FOXD4L4Q8WXT5 416 aaPredicted RBP8.11□□□□□ -1.11
CD44-232ENST00000531118 RSC1A1Q92681 617 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 PLCB1Q9NQ66 1216 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 KCTD5Q9NXV2 234 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 TBC1D29Q9UFV1 150 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 RARRES3Q9UL19 164 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 SNX7Q9UNH6 387 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 FARSAQ9Y285 508 aaKnown RBP8.11□□□□□ -1.11
CD44-232ENST00000531118 TMEM98Q9Y2Y6 226 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 PCYT1BQ9Y5K3 369 aaPredicted RBP8.11□□□□□ -1.11
CD44-232ENST00000531118 CCDC88CQ9P219 2028 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 CSPG4Q6UVK1 2322 aa8.11□□□□□ -1.11
CD44-232ENST00000531118 ABCA4P78363 2273 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 PRRC2AP48634 2157 aaKnown RBP8.1□□□□□ -1.11
CD44-232ENST00000531118 KIR2DS5A0A0G2JLQ3 304 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 A0A0G2JNG1 304 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 GOLGA8SH3BPF8 625 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 KIR2DS3K7RE56 304 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 TRAFD1O14545 582 aaPredicted RBP8.1□□□□□ -1.11
CD44-232ENST00000531118 KIF1CO43896 1103 aaKnown RBP8.1□□□□□ -1.11
CD44-232ENST00000531118 PRICKLE3O43900 615 aaPredicted RBP8.1□□□□□ -1.11
CD44-232ENST00000531118 NADKO95544 446 aaPredicted RBP8.1□□□□□ -1.11
CD44-232ENST00000531118 STSP08842 583 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 F3P13726 295 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 EDN3P14138 238 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 CD1EP15812 388 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 TYRP1P17643 537 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 SSTR2P30874 369 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 USP8P40818 1118 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 SYKP43405 635 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 GPR1P46091 355 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 GLRBP48167 497 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 RRADP55042 308 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 ATP11AP98196 1134 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 BCL2L1Q07817 233 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 GPS2Q13227 327 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 KIR2DS5Q14953 304 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 DBN1Q16643 649 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 CDO1Q16878 200 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 PARP15Q460N3 678 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 ANO6Q4KMQ2 910 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 COBLL1Q53SF7 1204 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 FAM69BQ5VUD6 431 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 IZUMO3Q5VZ72 239 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 IYDQ6PHW0 289 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 FIGNL1Q6PIW4 674 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 ADAMTSL4Q6UY14 1074 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 Q6ZS92 163 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 MED25Q71SY5 747 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 HSD11B1LQ7Z5J1 315 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 PHLDB2Q86SQ0 1253 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 SRLQ86TD4 932 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 KCNMB4Q86W47 210 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 ENDOVQ8N8Q3 282 aaKnown RBP8.1□□□□□ -1.11
CD44-232ENST00000531118 AVL9Q8NBF6 648 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 KLHL6Q8WZ60 621 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 MR1Q95460 341 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 PHACTR1Q9C0D0 580 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 UCK1Q9HA47 277 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 PDE7BQ9NP56 450 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 UBE2TQ9NPD8 197 aaPredicted RBP8.1□□□□□ -1.11
CD44-232ENST00000531118 CHST11Q9NPF2 352 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 CPNE7Q9UBL6 633 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 KCNK6Q9Y257 313 aa8.1□□□□□ -1.11
CD44-232ENST00000531118 NSD1Q96L73 2696 aaPredicted RBP8.09□□□□□ -1.11
CD44-232ENST00000531118 ANKRD12Q6UB98 2062 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 FLNAP21333 2647 aaKnown RBP8.09□□□□□ -1.11
CD44-232ENST00000531118 A0A1B0GUH1 482 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 FAM170AA1A519 330 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 PSMD11O00231 422 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 UBXN7O94888 489 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 CPP00450 1065 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 ALPPP05187 535 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 ACP5P13686 325 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 NELFEP18615 380 aaKnown RBP8.09□□□□□ -1.11
CD44-232ENST00000531118 TNFAIP3P21580 790 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 CMA1P23946 247 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 HTR1EP28566 365 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 ADRA1BP35368 520 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 GABRB2P47870 512 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 CSNK1DP48730 415 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 NDUFA8P51970 172 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 YBEYP58557 167 aaPredicted RBP8.09□□□□□ -1.11
CD44-232ENST00000531118 PDE1BQ01064 536 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 PAK1Q13153 545 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 KCNAB1Q14722 419 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 LLGL1Q15334 1064 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 ZNF630Q2M218 657 aaPredicted RBP8.09□□□□□ -1.11
CD44-232ENST00000531118 C15orf59Q2T9L4 293 aaPredicted RBP8.09□□□□□ -1.11
CD44-232ENST00000531118 ARSJQ5FYB0 599 aaPredicted RBP8.09□□□□□ -1.11
CD44-232ENST00000531118 CACHD1Q5VU97 1274 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 HGSNATQ68CP4 663 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 FAM198BQ6UWH4 519 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 IGFL3Q6UXB1 125 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 KRBA2Q6ZNG9 492 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 FAM92BQ6ZTR7 304 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 TMEM26Q6ZUK4 368 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 Q6ZVL8 140 aa8.09□□□□□ -1.11
CD44-232ENST00000531118 ENOSF1Q7L5Y1 443 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 511.8 ms