RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 SYTL1Q8IYJ3 562 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 ADGRF2Q8IZF7 708 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 LINC00518Q8N0U6 118 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 IQCKQ8N0W5 287 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 UBE2J2Q8N2K1 259 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 CCDC33Q8N5R6 958 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 SIRT6Q8N6T7 355 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 FAM133AQ8N9E0 248 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 MBD3L2Q8NHZ7 208 aaPredicted RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 CDC26Q8NHZ8 85 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 CYP2W1Q8TAV3 490 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 XAGE5Q8WWM1 108 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 ZNF641Q96N77 438 aaPredicted RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 TSNARE1Q96NA8 513 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 PI4K2AQ9BTU6 479 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 CALN1Q9BXU9 219 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 MAGEB5Q9BZ81 275 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 R3HDMLQ9H3Y0 253 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 NLRC4Q9NPP4 1024 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 ETNK2Q9NVF9 386 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 LUZP4Q9P127 313 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 ZNF624Q9P2J8 865 aaPredicted RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 SLC12A6Q9UHW9 1150 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 SLC8A2Q9UPR5 921 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 DTX4Q9Y2E6 619 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 WBP11Q9Y2W2 641 aaKnown RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 DTNAQ9Y4J8 743 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 ZNF532Q9HCE3 1301 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 SALL1Q9NSC2 1324 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 DAPK1P53355 1430 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 C9orf84Q5VXU9 1444 aa5.64□□□□□ -1.51
CD44-231ENST00000531110 CDK12Q9NYV4 1490 aaPredicted RBP5.64□□□□□ -1.51
CD44-231ENST00000531110 LAMC3Q9Y6N6 1575 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 TARBP1Q13395 1621 aaKnown RBP5.63□□□□□ -1.51
CD44-231ENST00000531110 COL11A2P13942 1736 aaPredicted RBP5.63□□□□□ -1.51
CD44-231ENST00000531110 CHD2O14647 1828 aaKnown RBP5.63□□□□□ -1.51
CD44-231ENST00000531110 EVPLLA8MZ36 301 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 H7C1Q1 480 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 UBXN8O00124 270 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 SGK1O00141 431 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 LAD1O00515 517 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 ZNF213O14771 459 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 RAD51BO15315 384 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 SUV39H1O43463 412 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 CCNDBP1O95273 360 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 C1RP00736 705 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 ERBB2P04626 1255 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 IFNA16P05015 189 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 LYNP07948 512 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 FAM228BP0C875 321 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 SLC2A3P11169 496 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 TNFSF4P23510 183 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 HTR7P34969 479 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 HOXD13P35453 343 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 ADD2P35612 726 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 GP5P40197 560 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 RPL5P46777 297 aaKnown RBP5.63□□□□□ -1.51
CD44-231ENST00000531110 RXRGP48443 463 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 VPS41P49754 854 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 TUBP50607 506 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 NANOS3P60323 173 aaKnown RBP5.63□□□□□ -1.51
CD44-231ENST00000531110 TFAP4Q01664 338 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 SPAG1Q07617 926 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 ERV3-1Q14264 604 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 LPIN1Q14693 890 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 ST3GAL2Q16842 350 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 LY6KQ17RY6 165 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 TMEM266Q2M3C6 531 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 WSCD2Q2TBF2 565 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 USP41Q3LFD5 358 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 TBRG1Q3YBR2 411 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 XKR9Q5GH70 373 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 TEX30Q5JUR7 227 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 PDPK2PQ6A1A2 396 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 IL31Q6EBC2 164 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 SUMO4Q6EEV6 95 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 ARMCX5Q6P1M9 558 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 CNSTQ6PJW8 725 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 MFSD6Q6ZSS7 791 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 UTS2BQ765I0 119 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 MIER3Q7Z3K6 550 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 RD3Q7Z3Z2 195 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 ADGRG6Q86SQ4 1221 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 CDR2LQ86X02 465 aaPredicted RBP5.63□□□□□ -1.51
CD44-231ENST00000531110 RASAL3Q86YV0 1011 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 DNAJC10Q8IXB1 793 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 MMGT1Q8N4V1 131 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 ZNF540Q8NDQ6 660 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 PIGOQ8TEQ8 1089 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 LRRC59Q96AG4 307 aaKnown RBP5.63□□□□□ -1.51
CD44-231ENST00000531110 CCDC51Q96ER9 411 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 RMDN3Q96TC7 470 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 SEC62Q99442 399 aaKnown RBP5.63□□□□□ -1.51
CD44-231ENST00000531110 GDF15Q99988 308 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 HERPUD2Q9BSE4 406 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 DPCDQ9BVM2 203 aaPredicted RBP5.63□□□□□ -1.51
CD44-231ENST00000531110 CINPQ9BW66 212 aaPredicted RBP5.63□□□□□ -1.51
CD44-231ENST00000531110 MTMR12Q9C0I1 747 aa5.63□□□□□ -1.51
CD44-231ENST00000531110 POLR1EQ9GZS1 481 aaKnown RBP5.63□□□□□ -1.51
CD44-231ENST00000531110 ANKRD2Q9GZV1 360 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms