RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 NME4O00746 187 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 AOC2O75106 756 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 CXCL10P02778 98 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 CHRM3P20309 590 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 HMGCLP35914 325 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 ROR2Q01974 943 aaKnown RBP17.06■□□□□ 0.32
BRCA2-204ENST00000530893 RCAN2Q14206 197 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 EML3Q32P44 896 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 C16orf59Q7L2K0 433 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 EEF1AKMT1Q8WVE0 214 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 NCSTNQ92542 709 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 LRRC58Q96CX6 371 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 ZFRQ96KR1 1074 aaKnown RBP17.06■□□□□ 0.32
BRCA2-204ENST00000530893 ZNF382Q96SR6 550 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 SLC30A3Q99726 388 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 OSBPL11Q9BXB4 747 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 P2RY12Q9H244 342 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 PIDD1Q9HB75 910 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 SLC52A3Q9NQ40 469 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 UBAP1Q9NZ09 502 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 NUDT4Q9NZJ9 180 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 IL17CQ9P0M4 197 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 BTRCQ9Y297 605 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 SLC4A7Q9Y6M7 1214 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 BRCA2P51587 3418 aa17.06■□□□□ 0.32
BRCA2-204ENST00000530893 FXYD1O00168 92 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 OR1I1O60431 355 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 FAM58BPP0C7Q3 252 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 IRF1P10914 325 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 RPL5P46777 297 aaKnown RBP17.05■□□□□ 0.32
BRCA2-204ENST00000530893 KCNK10P57789 538 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 AP1S1P61966 158 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 GPRIN3Q6ZVF9 776 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 SYVN1Q86TM6 617 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 SLC15A3Q8IY34 581 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 GALNT4Q8N4A0 578 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 HJURPQ8NCD3 748 aaPredicted RBP17.05■□□□□ 0.32
BRCA2-204ENST00000530893 LRTOMTQ8WZ04 291 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 SLC39A3Q9BRY0 314 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 FEM1AQ9BSK4 669 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 MRPS26Q9BYN8 205 aaKnown RBP17.05■□□□□ 0.32
BRCA2-204ENST00000530893 CCM2LQ9NUG4 571 aaPredicted RBP17.05■□□□□ 0.32
BRCA2-204ENST00000530893 ACTR3BQ9P1U1 418 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 GALPQ9UBC7 116 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 YIPF1Q9Y548 306 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 TNPO3Q9Y5L0 923 aaKnown RBP17.05■□□□□ 0.32
BRCA2-204ENST00000530893 SNX13Q9Y5W8 968 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 SLC30A1Q9Y6M5 507 aa17.05■□□□□ 0.32
BRCA2-204ENST00000530893 TANC1Q9C0D5 1861 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 DYTNA2CJ06 578 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 E2F3O00716 465 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 NPPAP01160 153 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 SMIM18P0DKX4 95 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 BMP2P12643 396 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 GRIA2P42262 883 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 RHOAP61586 193 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 ERVK-8P63133 956 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 TWF1Q12792 350 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 IKBKEQ14164 716 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 INPP5AQ14642 412 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 TGFBIQ15582 683 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 CNPY1Q3B7I2 92 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 PDCD4Q53EL6 469 aaKnown RBP17.04■□□□□ 0.32
BRCA2-204ENST00000530893 LCN8Q6JVE9 175 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 CYP2R1Q6VVX0 501 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 ANKFN1Q8N957 763 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 SPDYE1Q8NFV5 336 aaPredicted RBP17.04■□□□□ 0.32
BRCA2-204ENST00000530893 CNBD2Q96M20 576 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 VN1R3Q9BXE9 311 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 SLC2A11Q9BYW1 496 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 CD274Q9NZQ7 290 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 ZIM2Q9NZV7 527 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 GIMAP2Q9UG22 337 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 PADI4Q9UM07 663 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 DHRS7Q9Y394 339 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 ZNF711Q9Y462 761 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 ANAPC1Q9H1A4 1944 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 A0A1B0GTL3 188 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 C2orf78A6NCI8 922 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 GRXCR2A6NFK2 248 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 PRMT5O14744 637 aaPredicted RBP17.04■□□□□ 0.32
BRCA2-204ENST00000530893 HNRNPRO43390 633 aaKnown RBP17.04■□□□□ 0.32
BRCA2-204ENST00000530893 SNAP91O60641 907 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 CLPTM1O96005 669 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 SOD2P04179 222 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 SLC6A2P23975 617 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 GRIA3P42263 894 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 CLCN7P51798 805 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 CDKL1Q00532 357 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 PLD1Q13393 1074 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 RBBP7Q16576 425 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 LINGO4Q6UY18 593 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 ADAMTSL2Q86TH1 951 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 CPNE9Q8IYJ1 553 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 DCAF4L2Q8NA75 395 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 SMIM14Q96QK8 99 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 COQ10BQ9H8M1 238 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 BPIFA1Q9NP55 256 aa17.04■□□□□ 0.32
BRCA2-204ENST00000530893 DNMT3BQ9UBC3 853 aaKnown RBP17.04■□□□□ 0.32
BRCA2-204ENST00000530893 ZNF225Q9UK10 706 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms