RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 ZNF805Q5CZA5 627 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 IGSF11Q5DX21 431 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 PRSS57Q6UWY2 283 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 SHFQ7M4L6 423 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 ZNF622Q969S3 477 aaKnown RBP eCLIP4.56□□□□□ -1.68
C11orf88-204ENST00000529661 MOAP1Q96BY2 351 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 RTP4Q96DX8 246 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 PGAP3Q96FM1 320 aaPredicted RBP4.56□□□□□ -1.68
C11orf88-204ENST00000529661 CEP295NLQ96MC4 621 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 LRFN5Q96NI6 719 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 DACH2Q96NX9 599 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 HAUS8Q9BT25 410 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 EPB41L5Q9HCM4 733 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 GDE1Q9NZC3 331 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 CPSF2Q9P2I0 782 aaKnown RBP4.56□□□□□ -1.68
C11orf88-204ENST00000529661 DNAJB4Q9UDY4 337 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 OR14J1Q9UGF5 321 aa4.56□□□□□ -1.68
C11orf88-204ENST00000529661 ZHX1Q9UKY1 873 aaPredicted RBP4.56□□□□□ -1.68
C11orf88-204ENST00000529661 AGO1Q9UL18 857 aaKnown RBP4.56□□□□□ -1.68
C11orf88-204ENST00000529661 TTC7AQ9ULT0 858 aaPredicted RBP4.56□□□□□ -1.68
C11orf88-204ENST00000529661 EVPLQ92817 2033 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 A0A1W2PRQ8 180 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 LNP1A1A4G5 178 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 A8MXE2 369 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 TIMM23O14925 209 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 G6PDP11413 515 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 RPL3P39023 403 aaKnown RBP4.55□□□□□ -1.68
C11orf88-204ENST00000529661 ROR1Q01973 937 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 SREBF2Q12772 1141 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 KIF5AQ12840 1032 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 EFNB3Q15768 340 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 EIF2S3LQ2VIR3 472 aaKnown RBP4.55□□□□□ -1.68
C11orf88-204ENST00000529661 TCP11X2Q5H9J9 407 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 PPP6R3Q5H9R7 873 aaPredicted RBP4.55□□□□□ -1.68
C11orf88-204ENST00000529661 ERMARDQ5T6L9 678 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 LCN10Q6JVE6 187 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 TAOK1Q7L7X3 1001 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 SDCCAG8Q86SQ7 713 aaPredicted RBP4.55□□□□□ -1.68
C11orf88-204ENST00000529661 NR2C2APQ86WQ0 139 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 ARID3BQ8IVW6 561 aaPredicted RBP4.55□□□□□ -1.68
C11orf88-204ENST00000529661 GPATCH11Q8N954 259 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 DUSP19Q8WTR2 217 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 APBB2Q92870 758 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 TMEM39BQ9GZU3 492 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 SIL1Q9H173 461 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 PIGMQ9H3S5 423 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 RABEP2Q9H5N1 569 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 TAB2Q9NYJ8 693 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 C5AR2Q9P296 337 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 SLC9A2Q9UBY0 812 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 ANAPC2Q9UJX6 822 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 PAM16Q9Y3D7 125 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 CCL27Q9Y4X3 112 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 TRPV2Q9Y5S1 764 aa4.55□□□□□ -1.68
C11orf88-204ENST00000529661 GPR75-ASB3A0A0A6YYF3 556 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 TCRBV21S2A2A0A5A6 115 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 PLSCR5A0PG75 271 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 M0QZ24 198 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 ZIC3O60481 467 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 CH25HO95992 272 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 EEF1DP29692 281 aaKnown RBP4.54□□□□□ -1.68
C11orf88-204ENST00000529661 MSH2P43246 934 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 GAS1P54826 345 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 ECT2LQ008S8 904 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 SPOCK1Q08629 439 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 GRSF1Q12849 480 aaKnown RBP eCLIP4.54□□□□□ -1.68
C11orf88-204ENST00000529661 SLC39A14Q15043 492 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 ALDH1L2Q3SY69 923 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 CRY2Q49AN0 593 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 C9orf152Q5JTZ5 239 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 C1orf141Q5JVX7 400 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 C9orf57Q5W0N0 161 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.54□□□□□ -1.68
C11orf88-204ENST00000529661 PLPPR4Q7Z2D5 763 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 C16orf82Q7Z2V1 217 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 ARMC9Q7Z3E5 817 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 FOXRED2Q8IWF2 684 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 BEST3Q8N1M1 668 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 GUF1Q8N442 669 aaKnown RBP4.54□□□□□ -1.68
C11orf88-204ENST00000529661 NUDCD1Q96RS6 583 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 PPIL3Q9H2H8 161 aaKnown RBP4.54□□□□□ -1.68
C11orf88-204ENST00000529661 MMP27Q9H306 513 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 SH3GLB2Q9NR46 395 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 TRMT1Q9NXH9 659 aaKnown RBP4.54□□□□□ -1.68
C11orf88-204ENST00000529661 WDR35Q9P2L0 1181 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 CRNNQ9UBG3 495 aaPredicted RBP4.54□□□□□ -1.68
C11orf88-204ENST00000529661 CDC14AQ9UNH5 594 aa4.54□□□□□ -1.68
C11orf88-204ENST00000529661 PPIEQ9UNP9 301 aaKnown RBP4.54□□□□□ -1.68
C11orf88-204ENST00000529661 ZNF541Q9H0D2 1346 aa4.53□□□□□ -1.68
C11orf88-204ENST00000529661 KANSL1LA0AUZ9 987 aa4.53□□□□□ -1.68
C11orf88-204ENST00000529661 CPED1A4D0V7 1026 aa4.53□□□□□ -1.68
C11orf88-204ENST00000529661 IFITM10A6NMD0 228 aa4.53□□□□□ -1.68
C11orf88-204ENST00000529661 H3BQ06 376 aaPredicted RBP4.53□□□□□ -1.68
C11orf88-204ENST00000529661 PSMD10O75832 226 aa4.53□□□□□ -1.68
C11orf88-204ENST00000529661 PPP1R3DO95685 299 aa4.53□□□□□ -1.68
C11orf88-204ENST00000529661 ABCB1P08183 1280 aaPredicted RBP4.53□□□□□ -1.68
C11orf88-204ENST00000529661 GLULP15104 373 aa4.53□□□□□ -1.68
C11orf88-204ENST00000529661 PRLRP16471 622 aa4.53□□□□□ -1.68
C11orf88-204ENST00000529661 CAPZA2P47755 286 aa4.53□□□□□ -1.68
C11orf88-204ENST00000529661 RAD23AP54725 363 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms