RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 PTPRCAPQ14761 206 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 CHST15Q7LFX5 561 aaPredicted RBP17.13■□□□□ 0.33
USP35-202ENST00000528910 LINC00523Q86TU6 105 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 LRRTM4Q86VH4 590 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 PROSER1Q86XN7 944 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 CCNJLQ8IV13 435 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 ZNF547Q8IVP9 402 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 ARL14Q8N4G2 192 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 GLIS1Q8NBF1 620 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 PATE1Q8WXA2 126 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 TIMM29Q9BSF4 260 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 ZCCHC2Q9C0B9 1178 aaKnown RBP17.13■□□□□ 0.33
USP35-202ENST00000528910 CCDC86Q9H6F5 360 aaKnown RBP17.13■□□□□ 0.33
USP35-202ENST00000528910 ETNK1Q9HBU6 452 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 PAK5Q9P286 719 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 FKBPLQ9UIM3 349 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 KCNK6Q9Y257 313 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 DRG1Q9Y295 367 aaKnown RBP17.13■□□□□ 0.33
USP35-202ENST00000528910 KCTD3Q9Y597 815 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 PCDHB1Q9Y5F3 818 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 BPTFQ12830 3046 aa17.13■□□□□ 0.33
USP35-202ENST00000528910 SRP72O76094 671 aaKnown RBP17.12■□□□□ 0.33
USP35-202ENST00000528910 RPLP0P05388 317 aaKnown RBP17.12■□□□□ 0.33
USP35-202ENST00000528910 PSMA3P25788 255 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 XIAPP98170 497 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 LONRF2Q1L5Z9 754 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 LDLRAP1Q5SW96 308 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 GPRC6AQ5T6X5 926 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 CRTC3Q6UUV7 619 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 SLC35F6Q8N357 371 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 SFRP1Q8N474 314 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 CCDC89Q8N998 374 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 OR13C4Q8NGS5 318 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 MDM1Q8TC05 714 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 SLC37A2Q8TED4 501 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 LRRN3Q9H3W5 708 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 HOMER3Q9NSC5 361 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 LRIT1Q9P2V4 623 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 TBC1D29Q9UFV1 150 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 ZMIZ1Q9ULJ6 1067 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 TTC7AQ9ULT0 858 aaPredicted RBP17.12■□□□□ 0.33
USP35-202ENST00000528910 ENTPD2Q9Y5L3 495 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 WDFY3Q8IZQ1 3526 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 FREM2Q5SZK8 3169 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 PIKFYVEQ9Y2I7 2098 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 CACNA1BQ00975 2339 aa17.12■□□□□ 0.33
USP35-202ENST00000528910 H7C0S8 307 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 KMOO15229 486 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 KRT37O76014 449 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 CDK14O94921 469 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 EML2O95834 649 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 F3P13726 295 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 ETS1P14921 441 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 HADHAP40939 763 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 CCL7P80098 99 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 B4GALNT1Q00973 533 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 TMEM115Q12893 351 aaPredicted RBP17.11■□□□□ 0.33
USP35-202ENST00000528910 NFATC2Q13469 925 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 C11orf96Q7Z7L8 435 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 PRUNE1Q86TP1 453 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 TAB3Q8N5C8 712 aaPredicted RBP17.11■□□□□ 0.33
USP35-202ENST00000528910 PRELID2Q8N945 189 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 ZNF398Q8TD17 642 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 PBKQ96KB5 322 aa17.11■□□□□ 0.33
USP35-202ENST00000528910 EIF2B3Q9NR50 452 aaKnown RBP17.11■□□□□ 0.33
USP35-202ENST00000528910 UGT1A9O60656 530 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 SLC2A4P14672 509 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 ZNF7P17097 686 aaPredicted RBP17.1■□□□□ 0.33
USP35-202ENST00000528910 UGT1A6P19224 532 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 UGT1A1P22309 533 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 UGT1A4P22310 534 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 MSNP26038 577 aaKnown RBP17.1■□□□□ 0.33
USP35-202ENST00000528910 RPL22P35268 128 aaKnown RBP17.1■□□□□ 0.33
USP35-202ENST00000528910 UGT1A3P35503 534 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 UGT1A5P35504 534 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 GPR3P46089 330 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 CDH17Q12864 832 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 GTF2H3Q13889 308 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 CLPPQ16740 277 aaPredicted RBP17.1■□□□□ 0.33
USP35-202ENST00000528910 INSCQ1MX18 579 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.1■□□□□ 0.33
USP35-202ENST00000528910 C4orf22Q6V702 233 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 RASGEF1AQ8N9B8 481 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 GDAP1Q8TB36 358 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 DNAJC1Q96KC8 554 aaKnown RBP17.1■□□□□ 0.33
USP35-202ENST00000528910 GFM1Q96RP9 751 aaKnown RBP17.1■□□□□ 0.33
USP35-202ENST00000528910 SYNDIG1Q9H7V2 258 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 UGT1A7Q9HAW7 530 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 UGT1A10Q9HAW8 530 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 UGT1A8Q9HAW9 530 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 SARS2Q9NP81 518 aaKnown RBP17.1■□□□□ 0.33
USP35-202ENST00000528910 RAB6BQ9NRW1 208 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 NLE1Q9NVX2 485 aaPredicted RBP17.1■□□□□ 0.33
USP35-202ENST00000528910 SLC23A2Q9UGH3 650 aa17.1■□□□□ 0.33
USP35-202ENST00000528910 KIR2DS5A0A0G2JLQ3 304 aa17.09■□□□□ 0.33
USP35-202ENST00000528910 A0A0G2JNG1 304 aa17.09■□□□□ 0.33
USP35-202ENST00000528910 MROH6A6NGR9 719 aa17.09■□□□□ 0.33
USP35-202ENST00000528910 RHPN2P1A8MT19 583 aa17.09■□□□□ 0.33
USP35-202ENST00000528910 KIR2DS3K7RE56 304 aa17.09■□□□□ 0.33
USP35-202ENST00000528910 TAF4O00268 1085 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms