RNA–Protein interactions for RNA: ENST00000528396.5

CAPN1-215, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-215ENST00000528396 LRIT1Q9P2V4 623 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 FKBPLQ9UIM3 349 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 CRLS1Q9UJA2 301 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 KCNK6Q9Y257 313 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 PLEKHM1Q9Y4G2 1056 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 KCTD3Q9Y597 815 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 SLC30A1Q9Y6M5 507 aa13.23□□□□□ -0.29
CAPN1-215ENST00000528396 TMEM8BA6NDV4 472 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 KMOO15229 486 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 NUDT21O43809 227 aaKnown RBP13.22□□□□□ -0.29
CAPN1-215ENST00000528396 NOBOXO60393 691 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 SRP72O76094 671 aaKnown RBP13.22□□□□□ -0.29
CAPN1-215ENST00000528396 ECEL1O95672 775 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 RPLP0P05388 317 aaKnown RBP13.22□□□□□ -0.29
CAPN1-215ENST00000528396 RALBP11234 206 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 KCNJ1P48048 391 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 MAZP56270 477 aaKnown RBP13.22□□□□□ -0.29
CAPN1-215ENST00000528396 TMEM115Q12893 351 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-215ENST00000528396 SEMA5AQ13591 1074 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 GPRC6AQ5T6X5 926 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 DENND5AQ6IQ26 1287 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 PRUNE1Q86TP1 453 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 KLHDC8BQ8IXV7 354 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 DCBLD1Q8N8Z6 715 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 OR52K1Q8NGK4 314 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 OR13C4Q8NGS5 318 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 MAGOHBQ96A72 148 aaKnown RBP13.22□□□□□ -0.29
CAPN1-215ENST00000528396 ULK4Q96C45 1275 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 NXPE2Q96DL1 559 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 MS4A14Q96JA4 679 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 OSBPL9Q96SU4 736 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 AP1M1Q9BXS5 423 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 CCDC86Q9H6F5 360 aaKnown RBP13.22□□□□□ -0.29
CAPN1-215ENST00000528396 AK5Q9Y6K8 562 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 RNF215Q9Y6U7 377 aa13.22□□□□□ -0.29
CAPN1-215ENST00000528396 ANKRD11Q6UB99 2663 aaPredicted RBP13.22□□□□□ -0.29
CAPN1-215ENST00000528396 ASXL3Q9C0F0 2248 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 TRBV23OR9-2A0A075B6M9 112 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 TRABD2BA6NFA1 517 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 PDZK1P1A8MUH7 402 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 CFAP99D6REC4 459 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 CSO75390 466 aaKnown RBP13.21□□□□□ -0.29
CAPN1-215ENST00000528396 TCEA3O75764 348 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 PROS1P07225 676 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 ZSCAN5DPP0CG00 497 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 PNLIPP16233 465 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 ZNF7P17097 686 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-215ENST00000528396 ALDH4A1P30038 563 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 RPL22P35268 128 aaKnown RBP13.21□□□□□ -0.29
CAPN1-215ENST00000528396 ZNF140P52738 457 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-215ENST00000528396 NFATC2Q13469 925 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 HLTFQ14527 1009 aaKnown RBP eCLIP13.21□□□□□ -0.29
CAPN1-215ENST00000528396 SKIDA1Q1XH10 827 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 ZRANB3Q5FWF4 1079 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 CCNJLQ8IV13 435 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 CACTIN-AS1Q8N1I8 211 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 RASGEF1CQ8N431 466 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 ARL14Q8N4G2 192 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 PRELID2Q8N945 189 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 DDHD1Q8NEL9 900 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 ZCCHC14Q8WYQ9 949 aaKnown RBP13.21□□□□□ -0.29
CAPN1-215ENST00000528396 GATA6Q92908 595 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 ZNF514Q96K75 400 aaPredicted RBP13.21□□□□□ -0.29
CAPN1-215ENST00000528396 DNAJC1Q96KC8 554 aaKnown RBP13.21□□□□□ -0.29
CAPN1-215ENST00000528396 SMOXQ9NWM0 555 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 SNX12Q9UMY4 172 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 DNAJC16Q9Y2G8 782 aa13.21□□□□□ -0.29
CAPN1-215ENST00000528396 CHD6Q8TD26 2715 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 PTPRBP23467 1997 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 CCDC78A2IDD5 438 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 HEATR9A2RTY3 570 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 USP27XA6NNY8 438 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 AP3B1O00203 1094 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 GPR39O43194 453 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 LDB2O43679 373 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 SUN1O94901 812 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 TCP1P17987 556 aaKnown RBP13.2□□□□□ -0.3
CAPN1-215ENST00000528396 IDSP22304 550 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 MC4RP32245 332 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 VPS41P49754 854 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 TERF1P54274 439 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 CCL7P80098 99 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 TRIP13Q15645 432 aaPredicted RBP13.2□□□□□ -0.3
CAPN1-215ENST00000528396 ST3GAL2Q16842 350 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 AMZ1Q400G9 498 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 MAP9Q49MG5 647 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 CCDC38Q502W7 563 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 CDCP2Q5VXM1 449 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 TAS2R42Q7RTR8 314 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 SNX20Q7Z614 316 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 SFTPA2Q8IWL1 248 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 TRIM48Q8IWZ4 208 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 GLIS1Q8NBF1 620 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 AVL9Q8NBF6 648 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 PPHLN1Q8NEY8 458 aaKnown RBP13.2□□□□□ -0.3
CAPN1-215ENST00000528396 HEXDCQ8WVB3 486 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 PATE1Q8WXA2 126 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.2□□□□□ -0.3
CAPN1-215ENST00000528396 SLC38A3Q99624 504 aa13.2□□□□□ -0.3
CAPN1-215ENST00000528396 C19orf43Q9BQ61 176 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms