RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 WBP1LQ9NX94 342 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 WARS2Q9UGM6 360 aaKnown RBP12.42□□□□□ -0.42
CAPN1-208ENST00000527323 CDH9Q9ULB4 789 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 USP22Q9UPT9 525 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 PCDHA9Q9Y5H5 950 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 K7EPI3 171 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 FGF10O15520 208 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-208ENST00000527323 TPD52L2O43399 206 aaKnown RBP12.42□□□□□ -0.42
CAPN1-208ENST00000527323 CD1DP15813 335 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 MATN1P21941 496 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 ARL1P40616 181 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-208ENST00000527323 MAGEA10P43363 369 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-208ENST00000527323 DSC2Q02487 901 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 YWHAHQ04917 246 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-208ENST00000527323 TNK2Q07912 1038 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 NFATC3Q12968 1075 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 PTPRCAPQ14761 206 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 GPNMBQ14956 572 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 PCBP1Q15365 356 aaKnown RBP eCLIP12.42□□□□□ -0.421e-8■■■■■ 32.7
CAPN1-208ENST00000527323 GALNT18Q6P9A2 607 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 SFRP1Q8N474 314 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 GOLM1Q8NBJ4 401 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 BIRC7Q96CA5 298 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 TUBB1Q9H4B7 451 aa12.42□□□□□ -0.42
CAPN1-208ENST00000527323 SDR39U1Q9NRG7 319 aaPredicted RBP12.42□□□□□ -0.42
CAPN1-208ENST00000527323 FUOMA2VDF0 154 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 CCDC154A6NI56 674 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 ARVCFO00192 962 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 SLC7A4O43246 635 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 KCNH1O95259 989 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 FGF4P08620 206 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 SLC2A3P11169 496 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 PCNAP12004 261 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 PCSK1P29120 753 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 EEF1DP29692 281 aaKnown RBP12.41□□□□□ -0.42
CAPN1-208ENST00000527323 OR1G1P47890 313 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 HLCSP50747 726 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 MGAT3Q09327 533 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 OR4D1Q15615 310 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 PAGE3Q5JUK9 113 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 MARC1Q5VT66 337 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 TBPL2Q6SJ96 375 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 KDELC1Q6UW63 502 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 RALGPS2Q86X27 583 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-208ENST00000527323 COLGALT2Q8IYK4 626 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 TMEM86AQ8N2M4 240 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 SLC15A4Q8N697 577 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 OSCP1Q8WVF1 389 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 PPP1R10Q96QC0 940 aaKnown RBP12.41□□□□□ -0.42
CAPN1-208ENST00000527323 TRIM54Q9BYV2 358 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 CCDC68Q9H2F9 335 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 C8orf4Q9NR00 106 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 INTS10Q9NVR2 710 aaKnown RBP12.41□□□□□ -0.42
CAPN1-208ENST00000527323 SUN2Q9UH99 717 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 A0A1W2PP18 115 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 NCF1BA6NI72 391 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-208ENST00000527323 NCF1CA8MVU1 366 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-208ENST00000527323 IRAK2O43187 625 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 GLP2RO95838 553 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 THP07101 528 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 C7P10643 843 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 NCF1P14598 390 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-208ENST00000527323 HOXC8P31273 242 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 POLR2IP36954 125 aaKnown RBP12.41□□□□□ -0.42
CAPN1-208ENST00000527323 RENBPP51606 427 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 SLC14A2Q15849 920 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 TIGD2Q4W5G0 525 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 EGFLAMQ63HQ2 1017 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.41□□□□□ -0.42
CAPN1-208ENST00000527323 C14orf80Q86SX3 495 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 STK32CQ86UX6 486 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 BLOC1S5Q8TDH9 187 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 ACDQ96AP0 544 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 TSPAN18Q96SJ8 248 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 DOK1Q99704 481 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 C1orf50Q9BV19 199 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 SLAMF8Q9P0V8 285 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 UBA6A0AVT1 1052 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-208ENST00000527323 CFAP99D6REC4 459 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 J3KR12 359 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 GPR182O15218 404 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 SOAT2O75908 522 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 CYBBP04839 570 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 UFM1P61960 85 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 PLIN5Q00G26 463 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 CLCQ05315 142 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 SLC10A7Q0GE19 358 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 TEX37Q96LM6 180 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 CCDC138Q96M89 665 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 SLC30A3Q99726 388 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 YTHDF1Q9BYJ9 559 aaKnown RBP12.41□□□□□ -0.42
CAPN1-208ENST00000527323 MFSD1Q9H3U5 465 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 BLOC1S6Q9UL45 172 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 RNF112Q9ULX5 631 aa12.41□□□□□ -0.42
CAPN1-208ENST00000527323 TRIM64A6NGJ6 449 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 E9PAM4 449 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 KPNA6O60684 536 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 MATN4O95460 622 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 ESRRBO95718 433 aa12.4□□□□□ -0.42
CAPN1-208ENST00000527323 FUCA1P04066 466 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms