RNA–Protein interactions for RNA: ENST00000526548.3

PICALM-205, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 1 (best)

Gene PICALM, Length 738 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-205ENST00000526548 STXBP2Q15833 593 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 SNRNP35Q16560 246 aaKnown RBP4.47□□□□□ -1.69
PICALM-205ENST00000526548 UGCGQ16739 394 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 P3H1Q32P28 736 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 TUBB8Q3ZCM7 444 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 TDRD12Q587J7 1177 aaKnown RBP4.47□□□□□ -1.69
PICALM-205ENST00000526548 XKR9Q5GH70 373 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 ALS2CLQ60I27 953 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 KRT39Q6A163 491 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 SNRNP48Q6IEG0 339 aaKnown RBP4.47□□□□□ -1.69
PICALM-205ENST00000526548 CAPRIN2Q6IMN6 1127 aaKnown RBP4.47□□□□□ -1.69
PICALM-205ENST00000526548 C11orf63Q6NUN7 778 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 TRILQ7L0X0 811 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 PLPPR4Q7Z2D5 763 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 NT5DC3Q86UY8 548 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 ZNF677Q86XU0 584 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 SPATA2LQ8IUW3 424 aaPredicted RBP4.47□□□□□ -1.69
PICALM-205ENST00000526548 DDIASQ8IXT1 998 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 IFT20Q8IY31 132 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 SYCP3Q8IZU3 236 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 IQCKQ8N0W5 287 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 CPXCR1Q8N123 301 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 RNF152Q8N8N0 203 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 FAM47BQ8NA70 645 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 USP38Q8NB14 1042 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 RFFLQ8WZ73 363 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 ATP2A3Q93084 1043 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 ZKSCAN4Q969J2 545 aaPredicted RBP4.47□□□□□ -1.69
PICALM-205ENST00000526548 EXOC4Q96A65 974 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 PPP1R10Q96QC0 940 aaKnown RBP4.47□□□□□ -1.69
PICALM-205ENST00000526548 NAP1L3Q99457 506 aaPredicted RBP4.47□□□□□ -1.69
PICALM-205ENST00000526548 AGPAT1Q99943 283 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 SH3GL2Q99962 352 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 SF3B5Q9BWJ5 86 aaKnown RBP4.47□□□□□ -1.69
PICALM-205ENST00000526548 TMEM117Q9H0C3 514 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 CARD9Q9H257 536 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.47□□□□□ -1.69
PICALM-205ENST00000526548 SLC9A2Q9UBY0 812 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 DNAJC12Q9UKB3 198 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 TFR2Q9UP52 801 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 SLC45A1Q9Y2W3 748 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 INSL5Q9Y5Q6 135 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 PLXNA1Q9UIW2 1896 aa4.47□□□□□ -1.69
PICALM-205ENST00000526548 IGKV6-21A0A0C4DH24 114 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 GSTTP1A0A1W2PQM5 241 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 DENND3A2RUS2 1198 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 POM121BA6NF01 834 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 ZNF233A6NK53 670 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 SRRM3A6NNA2 597 aaPredicted RBP4.46□□□□□ -1.7
PICALM-205ENST00000526548 K7ENM7 598 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 RHODO00212 210 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 EXTL3O43909 919 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 PQBP1O60828 265 aaKnown RBP4.46□□□□□ -1.7
PICALM-205ENST00000526548 GGPS1O95749 300 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 LDHAP00338 332 aaKnown RBP4.46□□□□□ -1.7
PICALM-205ENST00000526548 CYP1A2P05177 515 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 MXI1P50539 228 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 EFNA5P52803 228 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 GALCP54803 685 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 HMGCS2P54868 508 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 MFAP3P55082 362 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 CYP24A1Q07973 514 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 PTP4A2Q12974 167 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 PPIL2Q13356 520 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 CUL1Q13616 776 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 NFATC4Q14934 902 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 PSMD6Q15008 389 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 ZACNQ401N2 412 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 ARHGAP15Q53QZ3 475 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 WASHC2DQ5SRD0 308 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 HMBOX1Q6NT76 420 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 SLC39A4Q6P5W5 647 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 METTL7BQ6UX53 244 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 USP50Q70EL3 339 aaPredicted RBP4.46□□□□□ -1.7
PICALM-205ENST00000526548 USP43Q70EL4 1123 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 ERO1BQ86YB8 467 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 CCDC60Q8IWA6 550 aaPredicted RBP4.46□□□□□ -1.7
PICALM-205ENST00000526548 CD302Q8IX05 232 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 FBXL13Q8NEE6 735 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 LNX1Q8TBB1 728 aaPredicted RBP4.46□□□□□ -1.7
PICALM-205ENST00000526548 FAM71BQ8TC56 605 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 PSPC1Q8WXF1 523 aaKnown RBP4.46□□□□□ -1.7
PICALM-205ENST00000526548 TAF4BQ92750 862 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 PMM1Q92871 262 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 TIFAQ96CG3 184 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 GRAMD1AQ96CP6 724 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 IFT74Q96LB3 600 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 MPHOSPH6Q99547 160 aaKnown RBP4.46□□□□□ -1.7
PICALM-205ENST00000526548 JPH2Q9BR39 696 aaPredicted RBP4.46□□□□□ -1.7
PICALM-205ENST00000526548 CBWD1Q9BRT8 395 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 LRRC1Q9BTT6 524 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 ABHD14AQ9BUJ0 271 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 NFKBIZQ9BYH8 718 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 FAM129AQ9BZQ8 928 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 MROH8Q9H579 483 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 PRDM16Q9HAZ2 1276 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 SPAG4Q9NPE6 437 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 XPNPEP1Q9NQW7 623 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 NRBP2Q9NSY0 501 aa4.46□□□□□ -1.7
PICALM-205ENST00000526548 UVRAGQ9P2Y5 699 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms