RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 PRAC1Q96KF2 57 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 SYT15Q9BQS2 421 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 PIGQQ9BRB3 760 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 HERPUD2Q9BSE4 406 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 PHF7Q9BWX1 381 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 FGFBP2Q9BYJ0 223 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 TTYH1Q9H313 450 aaPredicted RBP2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 VEZTQ9HBM0 779 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 RASSF1Q9NS23 344 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 SLC38A7Q9NVC3 462 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 HSPB7Q9UBY9 170 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 DNAJB4Q9UDY4 337 aa2.38□□□□□ -2.03
ECHDC1-219ENST00000526299 GOLGA6L10A0A0M3HER8 536 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 ANKRD28O15084 1053 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 KCNN4O15554 427 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 PI15O43692 258 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 TSPAN3O60637 253 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 TRMUO75648 421 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 CLPTM1O96005 669 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 NGFP01138 241 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 ANXA7P20073 488 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 MCCP23508 829 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 ITGA3P26006 1051 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 ELF1P32519 619 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 APOBEC1P41238 236 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 GPD2P43304 727 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 GNAQP50148 359 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 FOXD4Q12950 439 aaPredicted RBP2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 TAF5Q15542 800 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 NFIL3Q16649 462 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 GTDC1Q4AE62 458 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 WDR45BQ5MNZ6 344 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 ZNF343Q6P1L6 599 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 SLC22A25Q6T423 547 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 C2CD5Q86YS7 1000 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 TMEM143Q96AN5 459 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 PABPC5Q96DU9 382 aaKnown RBP2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 REEP2Q9BRK0 252 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 RHNO1Q9BSD3 238 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 H2AFJQ9BTM1 129 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 USP44Q9H0E7 712 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 PLCB1Q9NQ66 1216 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 ZNF71Q9NQZ8 489 aaPredicted RBP2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 ECHDC1Q9NTX5 307 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 KLHL9Q9P2J3 617 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 PRO0461Q9UI25 63 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 A4GNTQ9UNA3 340 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 MOB4Q9Y3A3 225 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 UTYO14607 1347 aa2.37□□□□□ -2.03
ECHDC1-219ENST00000526299 FAM90A26D6RGX4 464 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 TNPO2O14787 897 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 NADKO95544 446 aaPredicted RBP2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 CEBPBP17676 345 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 EPHA2P29317 976 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 SNX16P57768 344 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 SLC12A1Q13621 1099 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 DUOXA1Q1HG43 343 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 SYCP2LQ5T4T6 812 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 ARHGEF16Q5VV41 709 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 ALS2CLQ60I27 953 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 PACS1Q6VY07 963 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 CACNA2D4Q7Z3S7 1137 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 LRRTM1Q86UE6 522 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 CCDC13Q8IYE1 715 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 GBGT1Q8N5D6 347 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 VPS37AQ8NEZ2 397 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 UTP15Q8TED0 518 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 OMA1Q96E52 524 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 RTP3Q9BQQ7 232 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 PCGF1Q9BSM1 259 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 GLIS2Q9BZE0 524 aaPredicted RBP2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 APOBEC3GQ9HC16 384 aaKnown RBP2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 KLK13Q9UKR3 277 aa2.36□□□□□ -2.03
ECHDC1-219ENST00000526299 IGLV3-10A0A075B6K4 115 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 TEX13CA0A0J9YWL9 993 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 ANKRD66B4E2M5 251 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 SLCO1B7G3V0H7 640 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 IRAK2O43187 625 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 NBNO60934 754 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 DUS4LO95620 317 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 KRTAP1-4P0C5Y4 121 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 FAM157CP0CG43 387 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 LIFP15018 202 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 UGT1A1P22309 533 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 CHKAP35790 457 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 HTR3AP46098 478 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 PAPOLAP51003 745 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 MAD2L1Q13257 205 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 USP41Q3LFD5 358 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 MAP9Q49MG5 647 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 MYCT1Q8N699 235 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 LBHD1Q9BQE6 289 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 LAT2Q9GZY6 243 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 CNOT7Q9UIV1 285 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 RIPOR2Q9Y4F9 1068 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 SCINQ9Y6U3 715 aa2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 ZNF646O15015 1829 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-219ENST00000526299 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.34□□□□□ -2.03
ECHDC1-219ENST00000526299 A0A087WW49 117 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms