RNA–Protein interactions for RNA: ENST00000525878.5

CSDE1-210, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-210ENST00000525878 H0YIN7 160 aa3.62□□□□□ -1.83
CSDE1-210ENST00000525878 M0QZ24 198 aa3.62□□□□□ -1.83
CSDE1-210ENST00000525878 SEC31AO94979 1220 aaKnown RBP3.62□□□□□ -1.83
CSDE1-210ENST00000525878 MAD2L1Q13257 205 aaPredicted RBP3.62□□□□□ -1.83
CSDE1-210ENST00000525878 RAB6CQ53S08 254 aa3.62□□□□□ -1.83
CSDE1-210ENST00000525878 MFSD6Q6ZSS7 791 aa3.62□□□□□ -1.83
CSDE1-210ENST00000525878 AMER3Q8N944 861 aa3.62□□□□□ -1.83
CSDE1-210ENST00000525878 ANKRD52Q8NB46 1076 aa3.62□□□□□ -1.83
CSDE1-210ENST00000525878 KLHL29Q96CT2 875 aa3.62□□□□□ -1.83
CSDE1-210ENST00000525878 MCRIP2Q9BUT9 160 aaKnown RBP3.62□□□□□ -1.83
CSDE1-210ENST00000525878 RAB6CQ9H0N0 254 aa3.62□□□□□ -1.83
CSDE1-210ENST00000525878 KLHL9Q9P2J3 617 aa3.62□□□□□ -1.83
CSDE1-210ENST00000525878 MEIOCA2RUB1 952 aa3.61□□□□□ -1.83
CSDE1-210ENST00000525878 ANKRD66B4E2M5 251 aa3.61□□□□□ -1.83
CSDE1-210ENST00000525878 NADKO95544 446 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-210ENST00000525878 GATA1P15976 413 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-210ENST00000525878 KRTAP13-3Q3SY46 172 aa3.61□□□□□ -1.83
CSDE1-210ENST00000525878 ADAMTSL4-AS1Q5T5F5 129 aa3.61□□□□□ -1.83
CSDE1-210ENST00000525878 ZNF613Q6PF04 617 aa3.61□□□□□ -1.83
CSDE1-210ENST00000525878 BMPERQ8N8U9 685 aa3.61□□□□□ -1.83
CSDE1-210ENST00000525878 PPHLN1Q8NEY8 458 aaKnown RBP3.61□□□□□ -1.83
CSDE1-210ENST00000525878 USP44Q9H0E7 712 aa3.61□□□□□ -1.83
CSDE1-210ENST00000525878 RAD21L1Q9H4I0 556 aa3.61□□□□□ -1.83
CSDE1-210ENST00000525878 SIX2Q9NPC8 291 aa3.61□□□□□ -1.83
CSDE1-210ENST00000525878 CCDC177Q9NQR7 707 aaPredicted RBP3.61□□□□□ -1.83
CSDE1-210ENST00000525878 SLC6A13Q9NSD5 602 aa3.61□□□□□ -1.83
CSDE1-210ENST00000525878 ASIC3Q9UHC3 531 aa3.61□□□□□ -1.83
CSDE1-210ENST00000525878 PRAG1Q86YV5 1406 aa3.61□□□□□ -1.83
CSDE1-210ENST00000525878 CCDC194A0A1B0GVG4 234 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 A0A1W2PNU3 283 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-210ENST00000525878 TMEM178BH3BS89 294 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 TNPO2O14787 897 aaKnown RBP3.6□□□□□ -1.83
CSDE1-210ENST00000525878 CLIC2O15247 247 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 BUD23O43709 281 aaKnown RBP3.6□□□□□ -1.83
CSDE1-210ENST00000525878 SRSF10O75494 262 aaKnown RBP3.6□□□□□ -1.83
CSDE1-210ENST00000525878 CLPTM1O96005 669 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 PLA2G4BP0C869 781 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 FAM157CP0CG43 387 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 UBA1P22314 1058 aaKnown RBP3.6□□□□□ -1.83
CSDE1-210ENST00000525878 BMXP51813 675 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 KRTAP12-2P59991 146 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 PRICKLE4Q2TBC4 344 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 P2RY8Q86VZ1 359 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 LONP2Q86WA8 852 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 RDM1Q8NG50 284 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 SYT11Q9BT88 431 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 TRPC7Q9HCX4 862 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 ASAH2Q9NR71 780 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 INTS10Q9NVR2 710 aaKnown RBP3.6□□□□□ -1.83
CSDE1-210ENST00000525878 KCNJ14Q9UNX9 436 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 GPR52Q9Y2T5 361 aa3.6□□□□□ -1.83
CSDE1-210ENST00000525878 FAM237AA0A1B0GTK4 181 aa3.59□□□□□ -1.83
CSDE1-210ENST00000525878 TTC36A6NLP5 189 aa3.59□□□□□ -1.83
CSDE1-210ENST00000525878 E9PQ18 207 aa3.59□□□□□ -1.83
CSDE1-210ENST00000525878 TFAP2AP05549 437 aa3.59□□□□□ -1.83
CSDE1-210ENST00000525878 ITGA3P26006 1051 aa3.59□□□□□ -1.83
CSDE1-210ENST00000525878 FFAR4Q5NUL3 377 aa3.59□□□□□ -1.83
CSDE1-210ENST00000525878 C10orf62Q5T681 223 aaPredicted RBP3.59□□□□□ -1.83
CSDE1-210ENST00000525878 PACS1Q6VY07 963 aa3.59□□□□□ -1.83
CSDE1-210ENST00000525878 CCDC13Q8IYE1 715 aa3.59□□□□□ -1.83
CSDE1-210ENST00000525878 GMPPAQ96IJ6 420 aaPredicted RBP3.59□□□□□ -1.83
CSDE1-210ENST00000525878 SLX1AQ9BQ83 275 aa3.59□□□□□ -1.83
CSDE1-210ENST00000525878 PSD2Q9BQI7 771 aa3.59□□□□□ -1.83
CSDE1-210ENST00000525878 GPR63Q9BZJ6 419 aa3.59□□□□□ -1.83
CSDE1-210ENST00000525878 APOBEC3GQ9HC16 384 aaKnown RBP3.59□□□□□ -1.83
CSDE1-210ENST00000525878 ZNF71Q9NQZ8 489 aaPredicted RBP3.59□□□□□ -1.83
CSDE1-210ENST00000525878 ATAD3AQ9NVI7 634 aa3.59□□□□□ -1.83
CSDE1-210ENST00000525878 KCND2Q9NZV8 630 aa3.59□□□□□ -1.83
CSDE1-210ENST00000525878 FLT1P17948 1338 aa3.59□□□□□ -1.83
CSDE1-210ENST00000525878 MAGEB17A8MXT2 336 aa3.58□□□□□ -1.84
CSDE1-210ENST00000525878 NBNO60934 754 aa3.58□□□□□ -1.84
CSDE1-210ENST00000525878 MLYCDO95822 493 aa3.58□□□□□ -1.84
CSDE1-210ENST00000525878 IFIT1P09914 478 aaKnown RBP3.58□□□□□ -1.84
CSDE1-210ENST00000525878 LIFP15018 202 aa3.58□□□□□ -1.84
CSDE1-210ENST00000525878 TYMPP19971 482 aa3.58□□□□□ -1.84
CSDE1-210ENST00000525878 GGT5P36269 586 aa3.58□□□□□ -1.84
CSDE1-210ENST00000525878 CPOXP36551 454 aa3.58□□□□□ -1.84
CSDE1-210ENST00000525878 PPARDQ03181 441 aa3.58□□□□□ -1.84
CSDE1-210ENST00000525878 GSTA3Q16772 222 aa3.58□□□□□ -1.84
CSDE1-210ENST00000525878 CTU2Q2VPK5 515 aaKnown RBP3.58□□□□□ -1.84
CSDE1-210ENST00000525878 CXorf66Q5JRM2 361 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-210ENST00000525878 SH2D5Q6ZV89 423 aa3.58□□□□□ -1.84
CSDE1-210ENST00000525878 LRRTM4Q86VH4 590 aa3.58□□□□□ -1.84
CSDE1-210ENST00000525878 SCML4Q8N228 414 aa3.58□□□□□ -1.84
CSDE1-210ENST00000525878 ABI3Q9P2A4 366 aa3.58□□□□□ -1.84
CSDE1-210ENST00000525878 DNAJB4Q9UDY4 337 aa3.58□□□□□ -1.84
CSDE1-210ENST00000525878 OR14J1Q9UGF5 321 aa3.58□□□□□ -1.84
CSDE1-210ENST00000525878 LRRC53A6NM62 1247 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 SLCO1B7G3V0H7 640 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 SYNCRIPO60506 623 aaKnown RBP3.57□□□□□ -1.84
CSDE1-210ENST00000525878 EML2O95834 649 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 ZNF182P17025 639 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-210ENST00000525878 GNAZP19086 355 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 NR2F2P24468 414 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 PTP4A2Q12974 167 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 TBX2Q13207 712 aaPredicted RBP3.57□□□□□ -1.84
CSDE1-210ENST00000525878 DUOXA1Q1HG43 343 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 SNAI3Q3KNW1 292 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 BHLHB9Q6PI77 547 aa3.57□□□□□ -1.84
CSDE1-210ENST00000525878 LDHAL6AQ6ZMR3 332 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms