RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 PATE1Q8WXA2 126 aa17.31■□□□□ 0.36
NR1H3-228ENST00000525441 LIN37Q96GY3 246 aaPredicted RBP17.31■□□□□ 0.36
NR1H3-228ENST00000525441 TTC25Q96NG3 672 aa17.31■□□□□ 0.36
NR1H3-228ENST00000525441 TMEM121Q9BTD3 319 aa17.31■□□□□ 0.36
NR1H3-228ENST00000525441 EPB41L5Q9HCM4 733 aa17.31■□□□□ 0.36
NR1H3-228ENST00000525441 THSD1Q9NS62 852 aa17.31■□□□□ 0.36
NR1H3-228ENST00000525441 PCDHGA8Q9Y5G5 932 aa17.31■□□□□ 0.36
NR1H3-228ENST00000525441 PCYT1BQ9Y5K3 369 aaPredicted RBP17.31■□□□□ 0.36
NR1H3-228ENST00000525441 ASPMQ8IZT6 3477 aa17.31■□□□□ 0.36
NR1H3-228ENST00000525441 UNC13CQ8NB66 2214 aa17.31■□□□□ 0.36
NR1H3-228ENST00000525441 DMXL2Q8TDJ6 3036 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 OR5K4A6NMS3 321 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 CASC3O15234 703 aaKnown RBP17.3■□□□□ 0.36
NR1H3-228ENST00000525441 RRP8O43159 456 aaKnown RBP17.3■□□□□ 0.36
NR1H3-228ENST00000525441 BUD23O43709 281 aaKnown RBP17.3■□□□□ 0.36
NR1H3-228ENST00000525441 CPNE6O95741 557 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 MLLT3P42568 568 aaPredicted RBP17.3■□□□□ 0.36
NR1H3-228ENST00000525441 FASLGP48023 281 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 OR1D5P58170 312 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 ERVPABLB-1P60509 514 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 CHRNA6Q15825 494 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 INSCQ1MX18 579 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 AMZ1Q400G9 498 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 MAP9Q49MG5 647 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 IGF2-ASQ6U949 168 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 LRRC69Q6ZNQ3 347 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 PIM3Q86V86 326 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 KLHDC8BQ8IXV7 354 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 SFRP1Q8N474 314 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 TRIM58Q8NG06 486 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 SLC37A2Q8TED4 501 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 DCBLD2Q96PD2 775 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 TIMM29Q9BSF4 260 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 LRRC40Q9H9A6 602 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 ARNT2Q9HBZ2 717 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 KLC4Q9NSK0 619 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 TBC1D29Q9UFV1 150 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 ATXN7L1Q9ULK2 861 aaPredicted RBP17.3■□□□□ 0.36
NR1H3-228ENST00000525441 ARL5AQ9Y689 179 aa17.3■□□□□ 0.36
NR1H3-228ENST00000525441 A0A087WV48 116 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 KIR2DS5A0A0G2JLQ3 304 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 A0A0G2JNG1 304 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 KIR2DS3K7RE56 304 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 B4GAT1O43505 415 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 TLX3O43711 291 aaPredicted RBP17.29■□□□□ 0.36
NR1H3-228ENST00000525441 SNX2O60749 519 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 MTX2O75431 263 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 F3P13726 295 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 ZNF7P17097 686 aaPredicted RBP17.29■□□□□ 0.36
NR1H3-228ENST00000525441 VCLP18206 1134 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 TMEM115Q12893 351 aaPredicted RBP17.29■□□□□ 0.36
NR1H3-228ENST00000525441 KIR2DS5Q14953 304 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 IYDQ6PHW0 289 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 FOXR1Q6PIV2 292 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 B3GNT8Q7Z7M8 397 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 SLC9B2Q86UD5 537 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 ATG4AQ8WYN0 398 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 TMEM159Q96B96 161 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 SH3KBP1Q96B97 665 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 RTP4Q96DX8 246 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 C19orf43Q9BQ61 176 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 FOXP3Q9BZS1 431 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 OSGEPL1Q9H4B0 414 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 SARS2Q9NP81 518 aaKnown RBP17.29■□□□□ 0.36
NR1H3-228ENST00000525441 SMOXQ9NWM0 555 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 KCNK4Q9NYG8 393 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 TMPRSS11EQ9UL52 423 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 PPP2R2CQ9Y2T4 447 aa17.29■□□□□ 0.36
NR1H3-228ENST00000525441 SCN8AQ9UQD0 1980 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 TRBV23OR9-2A0A075B6M9 112 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 PLD2O14939 933 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 PPM1DO15297 605 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 LIASO43766 372 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 UGT1A9O60656 530 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 PRAMEF1O95521 474 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 METTL18O95568 372 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 UGT1A6P19224 532 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 UGT1A1P22309 533 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 UGT1A4P22310 534 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 UGT1A3P35503 534 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 UGT1A5P35504 534 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 EIF2S3P41091 472 aaKnown RBP17.28■□□□□ 0.36
NR1H3-228ENST00000525441 GDF10P55107 478 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 PCBP4P57723 403 aaKnown RBP17.28■□□□□ 0.36
NR1H3-228ENST00000525441 HHEXQ03014 270 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 ZFP36L1Q07352 338 aaKnown RBP17.28■□□□□ 0.36
NR1H3-228ENST00000525441 OLIG2Q13516 323 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 SPARCL1Q14515 664 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 KHDC1Q4VXA5 237 aaKnown RBP17.28■□□□□ 0.36
NR1H3-228ENST00000525441 KCTD11Q693B1 232 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 RAB11FIP2Q7L804 512 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 TRAPPC5Q8IUR0 188 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 FBXO39Q8N4B4 442 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 DDHD1Q8NEL9 900 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 OR4K2Q8NGD2 314 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 ZNF398Q8TD17 642 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 MAIP1Q8WWC4 291 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 PDLIM2Q96JY6 352 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 SLC46A1Q96NT5 459 aa17.28■□□□□ 0.36
NR1H3-228ENST00000525441 SLC38A3Q99624 504 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms