RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 GRAMD1AQ96CP6 724 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 CRELD1Q96HD1 420 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 PRR11Q96HE9 360 aaPredicted RBP12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 TBL1YQ9BQ87 522 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 SEMA6CQ9H3T2 930 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 OSGEPL1Q9H4B0 414 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 PRDM8Q9NQV8 689 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 KLC4Q9NSK0 619 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 LHX6Q9UPM6 363 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 PKP3Q9Y446 797 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 DMXL2Q8TDJ6 3036 aa12.69□□□□□ -0.38
TRAPPC4-205ENST00000525079 KIF26BQ2KJY2 2108 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 ADAMTS20P59510 1910 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 GLYATL1P3A0A0U1RQE8 302 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 TNFSF15O95150 251 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 TPH1P17752 444 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 LPOP22079 712 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 MPSTP25325 297 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 CD1CP29017 333 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 RBMS1P29558 406 aaKnown RBP12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 PPM1FP49593 454 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 TMPRSS15P98073 1019 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 TMEM115Q12893 351 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 NFATC2Q13469 925 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 RPS6KA1Q15418 735 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 TAF1AQ15573 450 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 INSCQ1MX18 579 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 PARP6Q2NL67 630 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 MAP9Q49MG5 647 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 PHF19Q5T6S3 580 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 MEI1Q5TIA1 1274 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 DENND5AQ6IQ26 1287 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 IYDQ6PHW0 289 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 MICALCLQ6ZW33 695 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 RAB11FIP2Q7L804 512 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZNF438Q7Z4V0 828 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 PIM3Q86V86 326 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 LRRTM4Q86VH4 590 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 SLC13A5Q86YT5 568 aaPredicted RBP12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZNF547Q8IVP9 402 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 LSMEM2Q8N112 164 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 SFRP1Q8N474 314 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 FBXO39Q8N4B4 442 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 OR4K2Q8NGD2 314 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 TMEM74Q96NL1 305 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 VPS35Q96QK1 796 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 NUDT22Q9BRQ3 303 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 STRADBQ9C0K7 418 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 ASCL3Q9NQ33 180 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 FKBPLQ9UIM3 349 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 DNAJC16Q9Y2G8 782 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 WDFY3Q8IZQ1 3526 aa12.68□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZZEF1O43149 2961 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 A0A087WV48 116 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 C2orf81A6NN90 581 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 TMX2-CTNND1H3BSU7 103 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 GAPDHSO14556 408 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 CHUKO15111 745 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 KMOO15229 486 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 RRP8O43159 456 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 VEGFDO43915 354 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 HOXB3P14651 431 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZNF7P17097 686 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZFP36L1Q07352 338 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 MSLNQ13421 630 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 SNX1Q13596 522 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 GTF2H3Q13889 308 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 NR1D2Q14995 579 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 SEPT7Q16181 437 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZDHHC20Q5W0Z9 365 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZNF574Q6ZN55 896 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 LRRC69Q6ZNQ3 347 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 PRUNE1Q86TP1 453 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 OR13C4Q8NGS5 318 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 SNIP1Q8TAD8 396 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZNF398Q8TD17 642 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 BRSK1Q8TDC3 778 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 NAT14Q8WUY8 206 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 LIN37Q96GY3 246 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZNF578Q96N58 590 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 TTC25Q96NG3 672 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 SLC46A1Q96NT5 459 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 SLC38A3Q99624 504 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 PIH1D1Q9NWS0 290 aaKnown RBP12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 KCNK4Q9NYG8 393 aa12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 SCHIP1Q9P0W5 487 aaPredicted RBP12.67□□□□□ -0.38
TRAPPC4-205ENST00000525079 APC2O95996 2303 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 IGHV1OR21-1A0A087WYE8 117 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 A6NCN8 305 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 CCL22O00626 93 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 PLD2O14939 933 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 ZW10O43264 779 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 LIASO43766 372 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 DXOO77932 396 aaKnown RBP12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 PRAMEF1O95521 474 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 CPNE6O95741 557 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 F3P13726 295 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 ETS1P14921 441 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 ITIH1P19827 911 aa12.66□□□□□ -0.38
TRAPPC4-205ENST00000525079 CCKBRP32239 447 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms