RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	TNIP2	Q8NFZ5	429 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	SUN3	Q8TAQ9	357 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	POC1B	Q8TC44	478 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	BICD2	Q8TD16	824 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	NR4A3	Q92570	626 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	TMCO6	Q96DC7	493 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	ZNF668	Q96K58	619 aa	Predicted RBP	4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	ZBTB45	Q96K62	511 aa	Predicted RBP	4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	HIST1H2AA	Q96QV6	131 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	TRIB1	Q96RU8	372 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	CD180	Q99467	661 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	PAFAH2	Q99487	392 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	EPHX3	Q9H6B9	360 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	CXorf36	Q9H7Y0	433 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	MBNL1	Q9NR56	388 aa	Known RBP	4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	CGN	Q9P2M7	1197 aa	Known RBP	4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	HSPB7	Q9UBY9	170 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	FBXL17	Q9UF56	701 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	HOOK1	Q9UJC3	728 aa	Known RBP	4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	RIMKLB	Q9ULI2	386 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	SUFU	Q9UMX1	484 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	SMC3	Q9UQE7	1217 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	OSGIN2	Q9Y236	505 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	PCDHGA5	Q9Y5G8	931 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	PCDHGA1	Q9Y5H4	931 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	NPC1L1	Q9UHC9	1359 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	CENPF	P49454	3210 aa		4.36	□□□□□ -1.71
PCM1-223	ENST00000524356	HTT	P42858	3142 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	DLEC1	Q9Y238	1755 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	LRRD1	A4D1F6	860 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356		H0YGN5	161 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	UBE2Q2L	H0YL09	131 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356		H3BNX3	289 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	ZNF263	O14978	683 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	PAPSS1	O43252	624 aa	Predicted RBP	4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	LIAS	O43766	372 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	TLR2	O60603	784 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	TADA2A	O75478	443 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	CRYAB	P02511	175 aa	Known RBP	4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	PDHA1	P08559	390 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	TNNT1	P13805	278 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	FER	P16591	822 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	IL10	P22301	178 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	PTPN3	P26045	913 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	PBLD	P30039	288 aa	Predicted RBP	4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	CPOX	P36551	454 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	PBX1	P40424	430 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	IL15	P40933	162 aa	Predicted RBP	4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	RABIF	P47224	123 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	NDUFV1	P49821	464 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	PGD	P52209	483 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	DGKE	P52429	567 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	ADAR	P55265	1226 aa	Known RBP	4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	TIRAP	P58753	221 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	RPL15	P61313	204 aa	Known RBP	4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	HOXA4	Q00056	320 aa	Predicted RBP	4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	PIGF	Q07326	219 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	SCN1B	Q07699	218 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	GOLGA8DP	Q0D2H9	430 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	IFT88	Q13099	833 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	ALG11	Q2TAA5	492 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	SLC39A12	Q504Y0	691 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	PCID2	Q5JVF3	399 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	SH2D4B	Q5SQS7	431 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	TMEM81	Q6P7N7	255 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	ZCCHC12	Q6PEW1	402 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	ZNF790	Q6PG37	636 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	LINC00696	Q6ZRV3	163 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	PARS2	Q7L3T8	475 aa	Known RBP	4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	EGFL6	Q8IUX8	553 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	CNTN4	Q8IWV2	1026 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	SIX6OS1	Q8N1H7	587 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	CLEC4C	Q8WTT0	213 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	TMEM171	Q8WVE6	324 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	NPIPB3	Q92617	1050 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	PPP2R3C	Q969Q6	453 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	PGAM5	Q96HS1	289 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	LINC00615	Q96LM1	132 aa	Predicted RBP	4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	PKP4	Q99569	1192 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	STRA6	Q9BX79	667 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	HEMGN	Q9BXL5	484 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	KRT23	Q9C075	422 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	SIK2	Q9H0K1	926 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	GBA2	Q9HCG7	927 aa	Predicted RBP	4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	KCNK9	Q9NPC2	374 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	PFDN4	Q9NQP4	134 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	TAS2R3	Q9NYW6	316 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	HDAC6	Q9UBN7	1215 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	INTS6	Q9UL03	887 aa	Known RBP	4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	NENF	Q9UMX5	172 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	PPIE	Q9UNP9	301 aa	Known RBP	4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	SHOC2	Q9UQ13	582 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	NIP7	Q9Y221	180 aa	Known RBP eCLIP	4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	KCNK7	Q9Y2U2	307 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	ANGPTL3	Q9Y5C1	460 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	SQOR	Q9Y6N5	450 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	SESN1	Q9Y6P5	492 aa		4.35	□□□□□ -1.71
PCM1-223	ENST00000524356	ABCC12	Q96J65	1359 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms