RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 ASB8Q9H765 288 aa12.41□□□□□ -0.42
VEGFA-225ENST00000523950 TAAR2Q9P1P5 351 aa12.41□□□□□ -0.42
VEGFA-225ENST00000523950 ZNHIT2Q9UHR6 403 aa12.41□□□□□ -0.42
VEGFA-225ENST00000523950 ANGPTL2Q9UKU9 493 aa12.41□□□□□ -0.42
VEGFA-225ENST00000523950 TMPRSS11EQ9UL52 423 aa12.41□□□□□ -0.42
VEGFA-225ENST00000523950 WASF3Q9UPY6 502 aa12.41□□□□□ -0.42
VEGFA-225ENST00000523950 NEUROG3Q9Y4Z2 214 aa12.41□□□□□ -0.42
VEGFA-225ENST00000523950 KCTD3Q9Y597 815 aa12.41□□□□□ -0.42
VEGFA-225ENST00000523950 DNMT3AQ9Y6K1 912 aaPredicted RBP12.41□□□□□ -0.42
VEGFA-225ENST00000523950 U3KQA8 63 aa12.41□□□□□ -0.42
VEGFA-225ENST00000523950 CACNA1AO00555 2505 aa12.41□□□□□ -0.42
VEGFA-225ENST00000523950 PTPRBP23467 1997 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 FAM221BA6H8Z2 402 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 KLHL33A6NCF5 533 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 RALBP11234 206 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 MLNP12872 115 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 SLC2A4P14672 509 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 VCLP18206 1134 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 MC4RP32245 332 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 ACTR1BP42025 376 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 ACTR1AP61163 376 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 TMPRSS15P98073 1019 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 ACVR1Q04771 509 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 KCNJ11Q14654 390 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 PPP1R7Q15435 360 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 TRIP13Q15645 432 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-225ENST00000523950 SMAD1Q15797 465 aaKnown RBP12.4□□□□□ -0.42
VEGFA-225ENST00000523950 C14orf28Q4W4Y0 310 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 PCID2Q5JVF3 399 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 CERCAMQ5T4B2 595 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 TSTD2Q5T7W7 516 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 CHST15Q7LFX5 561 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-225ENST00000523950 TMPRSS7Q7RTY8 843 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 EFL1Q7Z2Z2 1120 aaKnown RBP12.4□□□□□ -0.42
VEGFA-225ENST00000523950 TMPRSS12Q86WS5 348 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 C17orf82Q86X59 251 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-225ENST00000523950 KYQ8NBH2 561 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 IFI44Q8TCB0 444 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 ZDHHC1Q8WTX9 485 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 CDKN2AIPNLQ96HQ2 116 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 CAPZA3Q96KX2 299 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 DDX47Q9H0S4 455 aaKnown RBP12.4□□□□□ -0.42
VEGFA-225ENST00000523950 SUDS3Q9H7L9 328 aaPredicted RBP12.4□□□□□ -0.42
VEGFA-225ENST00000523950 MRM3Q9HC36 420 aaKnown RBP12.4□□□□□ -0.42
VEGFA-225ENST00000523950 BFARQ9NZS9 450 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 GULP1Q9UBP9 304 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 CRLS1Q9UJA2 301 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 PADI4Q9UM07 663 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 TCAF1Q9Y4C2 921 aa12.4□□□□□ -0.42
VEGFA-225ENST00000523950 ARHGEF17Q96PE2 2063 aaPredicted RBP12.39□□□□□ -0.43
VEGFA-225ENST00000523950 TRBV5-4A0A0C4DH59 114 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 OR5K4A6NMS3 321 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 B4DGG1 531 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 CFAP99D6REC4 459 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 DYNC1I1O14576 645 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 FANCGO15287 622 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 ZW10O43264 779 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 NUDT21O43809 227 aaKnown RBP12.39□□□□□ -0.43
VEGFA-225ENST00000523950 NOBOXO60393 691 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 UGT1A9O60656 530 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 TUBB4AP04350 444 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 GLB1P16278 677 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 UGT1A6P19224 532 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 MSH3P20585 1137 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 UGT1A1P22309 533 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 UGT1A4P22310 534 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 AK4P27144 223 aaPredicted RBP12.39□□□□□ -0.43
VEGFA-225ENST00000523950 AKT1P31749 480 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 UGT1A3P35503 534 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 UGT1A5P35504 534 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 GRIA1P42261 906 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 VPS41P49754 854 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 CACNG1Q06432 222 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 PTK6Q13882 451 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 HLTFQ14527 1009 aaKnown RBP eCLIP12.39□□□□□ -0.43
VEGFA-225ENST00000523950 TCEA2Q15560 299 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 KHDC1Q4VXA5 237 aaKnown RBP12.39□□□□□ -0.43
VEGFA-225ENST00000523950 GUSBP11Q6P575 273 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 SLC30A9Q6PML9 568 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 AFTPHQ6ULP2 937 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 DHRS13Q6UX07 377 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 PCGF5Q86SE9 256 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 NXPE1Q8N323 547 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 CHCHD4Q8N4Q1 142 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 PNPLA1Q8N8W4 532 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 AVL9Q8NBF6 648 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 MCUQ8NE86 351 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.39□□□□□ -0.437e-6■■■■■ 27.5
VEGFA-225ENST00000523950 DCUN1D1Q96GG9 259 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 SGSM3Q96HU1 749 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 COPS8Q99627 209 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 UGT1A7Q9HAW7 530 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 UGT1A10Q9HAW8 530 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 UGT1A8Q9HAW9 530 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 XAB2Q9HCS7 855 aaKnown RBP12.39□□□□□ -0.43
VEGFA-225ENST00000523950 ARFGAP3Q9NP61 516 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 SPATS2LQ9NUQ6 558 aaKnown RBP12.39□□□□□ -0.43
VEGFA-225ENST00000523950 PIH1D1Q9NWS0 290 aaKnown RBP12.39□□□□□ -0.43
VEGFA-225ENST00000523950 SIRPGQ9P1W8 387 aa12.39□□□□□ -0.43
VEGFA-225ENST00000523950 HYAL3O43820 417 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms