RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	WDR72	Q3MJ13	1102 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	CTXN3	Q4LDR2	81 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	CCDC178	Q5BJE1	867 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	CCDC122	Q5T0U0	273 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZNF648	Q5T619	568 aa	Predicted RBP	5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	TMEM200B	Q69YZ2	307 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	ATL3	Q6DD88	541 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	ACAD10	Q6JQN1	1059 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	MIS18BP1	Q6P0N0	1132 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	ANGPTL8	Q6UXH0	198 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	RGS9BP	Q6ZS82	235 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	TMCO5A	Q8N6Q1	288 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	CADM4	Q8NFZ8	388 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	ST8SIA4	Q92187	359 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	DACH2	Q96NX9	599 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	SLC22A12	Q96S37	553 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	LLPH	Q9BRT6	129 aa	Known RBP	5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	MAK16	Q9BXY0	300 aa	Known RBP	5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	STK33	Q9BYT3	514 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	HAPLN2	Q9GZV7	340 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	IQCG	Q9H095	443 aa	Known RBP	5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	TDP1	Q9NUW8	608 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	DUS2	Q9NX74	493 aa	Known RBP	5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	TBC1D14	Q9P2M4	693 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	TUBD1	Q9UJT1	453 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	PTBP2	Q9UKA9	531 aa	Known RBP	5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	TMPRSS11E	Q9UL52	423 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	DTNA	Q9Y4J8	743 aa		5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636		V9GYY5	206 aa	Predicted RBP	5.2	□□□□□ -1.58
PABPC1-223	ENST00000523636	IGLV3-22	A0A075B6J6	115 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636		A0A0G2JNJ9	132 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	TMEM200C	A6NKL6	621 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	CCDC169	A6NNP5	214 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	FAM86B1	E9PN63	330 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636		H3BQV1	296 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	TULP2	O00295	520 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	APOL1	O14791	398 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	ASAP2	O43150	1006 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	KCNAB3	O43448	404 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	PRPSAP2	O60256	369 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	KERA	O60938	352 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	NDUFS2	O75306	463 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	B3GAT3	O94766	335 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	TMEM63A	O94886	807 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	APOL3	O95236	402 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	KAT7	O95251	611 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	FGFR1OP	O95684	399 aa	Known RBP	5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	CYP1A2	P05177	515 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	FAM86B2	P0C5J1	330 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	HOXB2	P14652	356 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	ADSL	P30566	484 aa	Predicted RBP	5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	NNMT	P40261	264 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	TXK	P42681	527 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	QARS	P47897	775 aa	Known RBP	5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	CCR5	P51681	352 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	CCR9	P51686	369 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	SLC12A3	P55017	1021 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	HAND2	P61296	217 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	VAMP2	P63027	116 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	CD83	Q01151	205 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	ACTN3	Q08043	901 aa	Predicted RBP	5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	ALX1	Q15699	326 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	5.19	□□□□□ -1.58	2e-81	■■□□□ 14.4
PABPC1-223	ENST00000523636	ALG11	Q2TAA5	492 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	PGS1	Q32NB8	556 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	KBTBD12	Q3ZCT8	623 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	FLYWCH1	Q4VC44	716 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	PITRM1	Q5JRX3	1037 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	PHF19	Q5T6S3	580 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	TXNDC8	Q6A555	127 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	GRAMD4	Q6IC98	578 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	TRMT10B	Q6PF06	316 aa	Known RBP	5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	MEX3B	Q6ZN04	569 aa	Known RBP	5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	MAEA	Q7L5Y9	396 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	CCDC83	Q8IWF9	413 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	REXO1L1P	Q8IX06	675 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	MAB21L3	Q8N8X9	362 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	OR6C4	Q8NGE1	309 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	OR5AN1	Q8NGI8	311 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	CCDC26	Q8TAB7	109 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	FATE1	Q969F0	183 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	MUL1	Q969V5	352 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	P2RY11	Q96G91	374 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	ATXN7L3B	Q96GX2	97 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	APIP	Q96GX9	242 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	ZNF764	Q96H86	408 aa	Predicted RBP	5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	PGBD1	Q96JS3	809 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	AK8	Q96MA6	479 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	PGLYRP2	Q96PD5	576 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	MTMR9	Q96QG7	549 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	ATP6V0B	Q99437	205 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	CGRRF1	Q99675	332 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	ANO3	Q9BYT9	981 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	C1orf21	Q9H246	121 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	MTG2	Q9H4K7	406 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	THAP9	Q9H5L6	903 aa		5.19	□□□□□ -1.58
PABPC1-223	ENST00000523636	RABEP2	Q9H5N1	569 aa		5.19	□□□□□ -1.58

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