RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 KIR2DS3K7RE56 304 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 ATMINO43313 823 aaPredicted RBP11.46□□□□□ -0.57
SDCBP-211ENST00000523441 SLC4A1P02730 911 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 EBLN1P0CF75 366 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 FGF5P12034 268 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 FOLR1P15328 257 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 RPL10P27635 214 aaKnown RBP11.46□□□□□ -0.57
SDCBP-211ENST00000523441 TEAD1P28347 426 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 SOX5P35711 763 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 DRG2P55039 364 aaKnown RBP11.46□□□□□ -0.57
SDCBP-211ENST00000523441 PDE1BQ01064 536 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 KIR2DS5Q14953 304 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 ERMARDQ5T6L9 678 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 ALS2CLQ60I27 953 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 HGSNATQ68CP4 663 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 TRIM72Q6ZMU5 477 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 TMEM26Q6ZUK4 368 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 RHOT1Q8IXI2 618 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 ELOA2Q8IYF1 753 aaPredicted RBP11.46□□□□□ -0.57
SDCBP-211ENST00000523441 NDUFAF2Q8N183 169 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 CBARPQ8N350 705 aaPredicted RBP11.46□□□□□ -0.57
SDCBP-211ENST00000523441 BBS5Q8N3I7 341 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 NSMCE1Q8WV22 266 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 PIH1D2Q8WWB5 315 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 THAP4Q8WY91 577 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 PCMTD1Q96MG8 357 aaPredicted RBP11.46□□□□□ -0.57
SDCBP-211ENST00000523441 OR2AG1Q9H205 316 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 SNX7Q9UNH6 387 aa11.46□□□□□ -0.57
SDCBP-211ENST00000523441 FARSAQ9Y285 508 aaKnown RBP11.46□□□□□ -0.57
SDCBP-211ENST00000523441 PCDHGA9Q9Y5G4 932 aaKnown RBP11.46□□□□□ -0.57
SDCBP-211ENST00000523441 PIKFYVEQ9Y2I7 2098 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 IGHV5-51A0A0C4DH38 117 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 A0A1W2PQ67 120 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 OR52A4PA6NMU1 304 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 TMEM63AO94886 807 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 CBX6O95503 412 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 ZNF8P17098 575 aaPredicted RBP11.45□□□□□ -0.58
SDCBP-211ENST00000523441 AMPD1P23109 780 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 SLC19A1P41440 591 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 MMP13P45452 471 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 AIF1P55008 147 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 UBE2IP63279 158 aaKnown RBP11.45□□□□□ -0.58
SDCBP-211ENST00000523441 PLEKHN1Q494U1 663 aaPredicted RBP11.45□□□□□ -0.58
SDCBP-211ENST00000523441 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.45□□□□□ -0.58
SDCBP-211ENST00000523441 MON1BQ7L1V2 547 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 SYVN1Q86TM6 617 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 ZC3H18Q86VM9 953 aaKnown RBP11.45□□□□□ -0.58
SDCBP-211ENST00000523441 TMEM126BQ8IUX1 230 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 ATPAF2Q8N5M1 289 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 LPCAT1Q8NF37 534 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 CXorf40BQ96DE9 158 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 MCCC1Q96RQ3 725 aaPredicted RBP11.45□□□□□ -0.58
SDCBP-211ENST00000523441 RANBP9Q96S59 729 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 GANQ9H2C0 597 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 EPB41L1Q9H4G0 881 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 SAMSN1Q9NSI8 373 aaKnown RBP11.45□□□□□ -0.58
SDCBP-211ENST00000523441 ETNK2Q9NVF9 386 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 CWC15Q9P013 229 aaKnown RBP11.45□□□□□ -0.58
SDCBP-211ENST00000523441 ZNF624Q9P2J8 865 aaPredicted RBP11.45□□□□□ -0.58
SDCBP-211ENST00000523441 ATXN10Q9UBB4 475 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 CHKBQ9Y259 395 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 DIDO1Q9BTC0 2240 aaKnown RBP11.45□□□□□ -0.58
SDCBP-211ENST00000523441 APCP25054 2843 aa11.45□□□□□ -0.58
SDCBP-211ENST00000523441 OR5K4A6NMS3 321 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 EPHB6O15197 1021 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 PRPSAP2O60256 369 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 MTA2O94776 668 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 CAPZBP47756 277 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 GLRBP48167 497 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 STC1P52823 247 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 GPR18Q14330 331 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 GPR19Q15760 415 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 ZRANB3Q5FWF4 1079 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 MARC1Q5VT66 337 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 PRAMEF17Q5VTA0 474 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 PHF13Q86YI8 300 aaPredicted RBP11.44□□□□□ -0.58
SDCBP-211ENST00000523441 IQCKQ8N0W5 287 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 ENDOVQ8N8Q3 282 aaKnown RBP11.44□□□□□ -0.58
SDCBP-211ENST00000523441 HSPH1Q92598 858 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 PNPLA2Q96AD5 504 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 ZDHHC12Q96GR4 267 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 ZNF599Q96NL3 588 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 MGME1Q9BQP7 344 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 ILKAPQ9H0C8 392 aaPredicted RBP11.44□□□□□ -0.58
SDCBP-211ENST00000523441 CHST8Q9H2A9 424 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 MLXIPLQ9NP71 852 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 GPR83Q9NYM4 423 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 DTLQ9NZJ0 730 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 VPS18Q9P253 973 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 SLC23A2Q9UGH3 650 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 CNOT6Q9ULM6 557 aaKnown RBP11.44□□□□□ -0.58
SDCBP-211ENST00000523441 ITPR3Q14573 2671 aa11.44□□□□□ -0.58
SDCBP-211ENST00000523441 CCDC88CQ9P219 2028 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 SETD2Q9BYW2 2564 aaPredicted RBP11.43□□□□□ -0.58
SDCBP-211ENST00000523441 A0A0J9YYE9 177 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 C1orf232A0A0U1RR37 186 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 LRRTM2O43300 516 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 HNRNPRO43390 633 aaKnown RBP11.43□□□□□ -0.58
SDCBP-211ENST00000523441 NUAK1O60285 661 aa11.43□□□□□ -0.58
SDCBP-211ENST00000523441 MTX2O75431 263 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms