RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 CYTIPO60759 359 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 GPR37L1O60883 481 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 CUTAO60888 179 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 ULK1O75385 1050 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 TNFRSF21O75509 655 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 CTAG2O75638 210 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 KRT36O76013 467 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 PCDH8O95206 1070 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 AHSA1O95433 338 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 VNN1O95497 513 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 PNPP00491 289 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 CSTAP01040 98 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 KRT8P05787 483 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 FABP1P07148 127 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 LYNP07948 512 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 PRR35P0CG20 571 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 ERVK-10P10266 1014 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 SAGP10523 405 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-216ENST00000523088 DBTP11182 482 aaKnown RBP7.49□□□□□ -1.21
HDAC3-216ENST00000523088 ODC1P11926 461 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 BMP1P13497 986 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 TCP1P17987 556 aaKnown RBP7.49□□□□□ -1.21
HDAC3-216ENST00000523088 RAB3AP20336 220 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 S100PP25815 95 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 CNTFP26441 200 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 ADRA1BP35368 520 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 MDH1P40925 334 aaKnown RBP7.49□□□□□ -1.21
HDAC3-216ENST00000523088 NRLP54845 237 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 SKP1P63208 163 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 DLG4P78352 724 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 FLOT2Q14254 428 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 PCBP1Q15365 356 aaKnown RBP eCLIP7.49□□□□□ -1.21
HDAC3-216ENST00000523088 SEC23BQ15437 767 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 TARBP2Q15633 366 aaKnown RBP7.49□□□□□ -1.21
HDAC3-216ENST00000523088 ADIPOQQ15848 244 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 KRT79Q5XKE5 535 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 TTC33Q6PID6 262 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-216ENST00000523088 LRRTM4Q86VH4 590 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 ZNF410Q86VK4 478 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 TDRPQ86YL5 185 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 SRRM1Q8IYB3 904 aaKnown RBP7.49□□□□□ -1.21
HDAC3-216ENST00000523088 ABI1Q8IZP0 508 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 PDIK1LQ8N165 341 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 ZNF366Q8N895 744 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 CMASQ8NFW8 434 aaPredicted RBP7.49□□□□□ -1.21
HDAC3-216ENST00000523088 OR8J2Q8NGG1 315 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 PABPC5Q96DU9 382 aaKnown RBP7.49□□□□□ -1.21
HDAC3-216ENST00000523088 MTBPQ96DY7 904 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 RNF31Q96EP0 1072 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 MBOAT7Q96N66 472 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 PANX2Q96RD6 677 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 NEU1Q99519 415 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 POP1Q99575 1024 aaKnown RBP7.49□□□□□ -1.21
HDAC3-216ENST00000523088 SEC22CQ9BRL7 303 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 MCMBPQ9BTE3 642 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 ADGRE3Q9BY15 652 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 DERL2Q9GZP9 239 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 HSD3B7Q9H2F3 369 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 CATSPERBQ9H7T0 1116 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 MINDY3Q9H8M7 445 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 AGO3Q9H9G7 860 aaKnown RBP7.49□□□□□ -1.21
HDAC3-216ENST00000523088 TMEM8AQ9HCN3 771 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 ERVK-5Q9HDB9 667 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 ARHGEF3Q9NR81 526 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 RGS18Q9NS28 235 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.49□□□□□ -1.21
HDAC3-216ENST00000523088 TMEM161AQ9NX61 479 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 NINJ2Q9NZG7 142 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 TXNDC16Q9P2K2 825 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 PRKAG3Q9UGI9 489 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 MAN1B1Q9UKM7 699 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 AKT3Q9Y243 479 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 HPSEQ9Y251 543 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 ARL2BPQ9Y2Y0 163 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 MYO7AQ13402 2215 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 ARID2Q68CP9 1835 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 CLUHO75153 1309 aa7.49□□□□□ -1.21
HDAC3-216ENST00000523088 A0A1W2PPH5 198 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 BDP1A6H8Y1 2624 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 FOXO6A8MYZ6 492 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 ZBTB42B2RXF5 422 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 CCRL2O00421 344 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 PGRMC2O15173 223 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 LILRB5O75023 590 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 NDUFS6O75380 124 aaKnown RBP7.48□□□□□ -1.21
HDAC3-216ENST00000523088 SPAG6O75602 509 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 PSMD10O75832 226 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 OR7A10O76100 309 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 AFPP02771 609 aaKnown RBP7.48□□□□□ -1.21
HDAC3-216ENST00000523088 GNAO1P09471 354 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 SPATA31D3P0C874 917 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 PF4V1P10720 104 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 PKMP14618 531 aaKnown RBP7.48□□□□□ -1.21
HDAC3-216ENST00000523088 HOXA9P31269 272 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 SLC5A2P31639 672 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 APOBEC3AP31941 199 aaPredicted RBP7.48□□□□□ -1.21
HDAC3-216ENST00000523088 CAPZA2P47755 286 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 OR3A3P47888 321 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 PIK3CGP48736 1102 aa7.48□□□□□ -1.21
HDAC3-216ENST00000523088 CCR9P51686 369 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms