RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 HMGCLP35914 325 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 MAPK10P53779 464 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 RWDD2BP57060 319 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 SQSTM1Q13501 440 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 TGIF1Q15583 401 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 PLA2G4EQ3MJ16 856 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 ATP13A5Q4VNC0 1218 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 ARHGAP40Q5TG30 622 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 PDPK2PQ6A1A2 396 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 SPC24Q8NBT2 197 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 USP7Q93009 1102 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 TMEM159Q96B96 161 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 CCDC74BQ96LY2 380 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 SRPK1Q96SB4 655 aaKnown RBP18.46■□□□□ 0.55
SPIDR-220ENST00000522900 CMKLR1Q99788 373 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 DESI2Q9BSY9 194 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 IL26Q9NPH9 171 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 KLC4Q9NSK0 619 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 IL17CQ9P0M4 197 aa18.46■□□□□ 0.55
SPIDR-220ENST00000522900 PRAMEF33A0A0G2JMD5 474 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 MACROD2A1Z1Q3 448 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 NVLO15381 856 aaKnown RBP18.45■□□□□ 0.54
SPIDR-220ENST00000522900 GPR39O43194 453 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 ZW10O43264 779 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 UGT1A9O60656 530 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 PRAMEF10O60809 474 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 UGT1A6P19224 532 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 UGT1A1P22309 533 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 UGT1A4P22310 534 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 PTPN7P35236 360 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 UGT1A3P35503 534 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 LIMK2P53671 638 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 TMPRSS3P57727 454 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 EIF3EP60228 445 aaKnown RBP18.45■□□□□ 0.54
SPIDR-220ENST00000522900 HHEXQ03014 270 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 MPP3Q13368 585 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 NFATC2Q13469 925 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 OLIG2Q13516 323 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 PTPRCAPQ14761 206 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 KIAA1328Q86T90 577 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 PHYKPLQ8IUZ5 450 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 ZNF547Q8IVP9 402 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 BLOC1S5Q8TDH9 187 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 CCDC97Q96F63 343 aaPredicted RBP18.45■□□□□ 0.54
SPIDR-220ENST00000522900 PLEKHG4BQ96PX9 1271 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 SLC38A3Q99624 504 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 FICDQ9BVA6 458 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 GBA3Q9H227 469 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 TRABDQ9H4I3 376 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 UGT1A7Q9HAW7 530 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 UGT1A10Q9HAW8 530 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 UGT1A8Q9HAW9 530 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 FOXJ2Q9P0K8 574 aa18.45■□□□□ 0.54
SPIDR-220ENST00000522900 SCHIP1Q9P0W5 487 aaPredicted RBP18.45■□□□□ 0.54
SPIDR-220ENST00000522900 PACSIN2Q9UNF0 486 aaPredicted RBP18.45■□□□□ 0.54
SPIDR-220ENST00000522900 UNC13CQ8NB66 2214 aa18.44■□□□□ 0.54
SPIDR-220ENST00000522900 C9orf172C9J069 976 aa18.44■□□□□ 0.54
SPIDR-220ENST00000522900 EFSO43281 561 aa18.44■□□□□ 0.54
SPIDR-220ENST00000522900 RBP3P10745 1247 aa18.44■□□□□ 0.54
SPIDR-220ENST00000522900 F3P13726 295 aa18.44■□□□□ 0.54
SPIDR-220ENST00000522900 CLCNKAP51800 687 aa18.44■□□□□ 0.54
SPIDR-220ENST00000522900 CHRNA6Q15825 494 aa18.44■□□□□ 0.54
SPIDR-220ENST00000522900 CLPPQ16740 277 aaPredicted RBP18.44■□□□□ 0.54
SPIDR-220ENST00000522900 ANKRD20A2Q5SQ80 823 aa18.44■□□□□ 0.54
SPIDR-220ENST00000522900 ANKRD20A1Q5TYW2 823 aa18.44■□□□□ 0.54
SPIDR-220ENST00000522900 ANKRD20A3Q5VUR7 823 aa18.44■□□□□ 0.54
SPIDR-220ENST00000522900 DARS2Q6PI48 645 aaKnown RBP18.44■□□□□ 0.54
SPIDR-220ENST00000522900 ZFAND4Q86XD8 727 aa18.44■□□□□ 0.54
SPIDR-220ENST00000522900 OR4D9Q8NGE8 314 aa18.44■□□□□ 0.54
SPIDR-220ENST00000522900 VPS35Q96QK1 796 aa18.44■□□□□ 0.54
SPIDR-220ENST00000522900 UBL7Q96S82 380 aaPredicted RBP18.44■□□□□ 0.54
SPIDR-220ENST00000522900 OSGEPL1Q9H4B0 414 aa18.44■□□□□ 0.54
SPIDR-220ENST00000522900 SARS2Q9NP81 518 aaKnown RBP18.44■□□□□ 0.54
SPIDR-220ENST00000522900 DNAJC16Q9Y2G8 782 aa18.44■□□□□ 0.54
SPIDR-220ENST00000522900 GPR89AB7ZAQ6 455 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 GAPDHSO14556 408 aaPredicted RBP18.43■□□□□ 0.54
SPIDR-220ENST00000522900 KMOO15229 486 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 KCNN4O15554 427 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 CDK14O94921 469 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 GPR89BP0CG08 455 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 FGF3P11487 239 aaPredicted RBP18.43■□□□□ 0.54
SPIDR-220ENST00000522900 ZNF7P17097 686 aaPredicted RBP18.43■□□□□ 0.54
SPIDR-220ENST00000522900 HLA-DPA1P20036 260 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 TNNT3P45378 269 aaPredicted RBP18.43■□□□□ 0.54
SPIDR-220ENST00000522900 GEMP55040 296 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 UCNP55089 124 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 TMEM115Q12893 351 aaPredicted RBP18.43■□□□□ 0.54
SPIDR-220ENST00000522900 SRSF6Q13247 344 aaKnown RBP18.43■□□□□ 0.54
SPIDR-220ENST00000522900 COL9A2Q14055 689 aaPredicted RBP18.43■□□□□ 0.54
SPIDR-220ENST00000522900 PCSK4Q6UW60 755 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 RANBP10Q6VN20 620 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 GLT6D1Q7Z4J2 308 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 SLC9B2Q86UD5 537 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 LRRTM4Q86VH4 590 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 CDKL3Q8IVW4 592 aaPredicted RBP18.43■□□□□ 0.54
SPIDR-220ENST00000522900 CCDC110Q8TBZ0 833 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 AHCYL2Q96HN2 611 aaKnown RBP18.43■□□□□ 0.54
SPIDR-220ENST00000522900 APOL2Q9BQE5 337 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 FSD1LQ9BXM9 530 aa18.43■□□□□ 0.54
SPIDR-220ENST00000522900 WDR70Q9NW82 654 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms