RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 H3BMM5 538 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 SEMA4FO95754 770 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 ESR1P03372 595 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 MT-ND3P03897 115 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 ALDOAP04075 364 aaKnown RBP12.94□□□□□ -0.34
CPNE3-205ENST00000522240 DCNP07585 359 aaKnown RBP12.94□□□□□ -0.34
CPNE3-205ENST00000522240 TBC1D3HP0C7X1 549 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 UGT1A6P19224 532 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 CD9P21926 228 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 UGT1A1P22309 533 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 UGT1A4P22310 534 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 UGT1A3P35503 534 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 UGT1A5P35504 534 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 NSG1P42857 185 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 CXCL12P48061 93 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 CSRP3P50461 194 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 MAGOHP61326 146 aaKnown RBP12.94□□□□□ -0.34
CPNE3-205ENST00000522240 ZKSCAN8Q15776 578 aaPredicted RBP12.94□□□□□ -0.34
CPNE3-205ENST00000522240 GPRC6AQ5T6X5 926 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 TBC1D3GQ6DHY5 549 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 RAET1GQ6H3X3 334 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 TBC1D3CQ6IPX1 549 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 ADAMTSL4Q6UY14 1074 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 PACS2Q86VP3 889 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 SRRM1Q8IYB3 904 aaKnown RBP12.94□□□□□ -0.34
CPNE3-205ENST00000522240 TBC1D3Q8IZP1 549 aaPredicted RBP12.94□□□□□ -0.34
CPNE3-205ENST00000522240 TP53I13Q8NBR0 393 aaPredicted RBP12.94□□□□□ -0.34
CPNE3-205ENST00000522240 BTN2A2Q8WVV5 523 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 GLYATL1Q969I3 302 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 ZBTB9Q96C00 473 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 TSPAN17Q96FV3 270 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 ATXN7L3BQ96GX2 97 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 ELMO2Q96JJ3 720 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 CLPBQ9H078 707 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 CCDC68Q9H2F9 335 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 FAM96AQ9H5X1 160 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 POPDC3Q9HBV1 291 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 SSU72Q9NP77 194 aaKnown RBP12.94□□□□□ -0.34
CPNE3-205ENST00000522240 CD93Q9NPY3 652 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.94□□□□□ -0.34
CPNE3-205ENST00000522240 GNPTGQ9UJJ9 305 aa12.94□□□□□ -0.34
CPNE3-205ENST00000522240 TRPM6Q9BX84 2022 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 IGHV1OR15-9A0A0B4J2B8 117 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 TMEM221A6NGB7 291 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 GOLGA8CPA6NN73 597 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 F8W8V4 182 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 K7ESF4 209 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 M0R296 226 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 QSOX1O00391 747 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 TPP1O14773 563 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 LATO43561 262 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 RFPL1O75677 317 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 F7P08709 466 aaPredicted RBP12.93□□□□□ -0.34
CPNE3-205ENST00000522240 RALBP11234 206 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 PKMP14618 531 aaKnown RBP12.93□□□□□ -0.34
CPNE3-205ENST00000522240 FDXRP22570 491 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 CD6P30203 668 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 HOXA6P31267 233 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 ACSL1P33121 698 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 CA5AP35218 305 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 NUDT1P36639 197 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 ABCG1P45844 678 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 GPR1P46091 355 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 CCR5P51681 352 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 PPP2CBP62714 309 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 PPP2CAP67775 309 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 SLC18A2Q05940 514 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 SGCGQ13326 291 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 FGL2Q14314 439 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 USP10Q14694 798 aaKnown RBP12.93□□□□□ -0.34
CPNE3-205ENST00000522240 LRRC14Q15048 493 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 WSCD2Q2TBF2 565 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 RBM20Q5T481 1227 aaKnown RBP12.93□□□□□ -0.34
CPNE3-205ENST00000522240 HECTD2Q5U5R9 776 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 KCTD16Q68DU8 428 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 ZNF549Q6P9A3 640 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 FAM124AQ86V42 546 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 EXOC3L1Q86VI1 746 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 GPATCH11Q8N954 259 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 KCNJ9Q92806 393 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 BIRC8Q96P09 236 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 LENG8Q96PV6 779 aaPredicted RBP12.93□□□□□ -0.34
CPNE3-205ENST00000522240 SMC6Q96SB8 1091 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 SLC17A9Q9BYT1 436 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 ZCCHC2Q9C0B9 1178 aaKnown RBP12.93□□□□□ -0.34
CPNE3-205ENST00000522240 PCED1AQ9H1Q7 454 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 PRMT8Q9NR22 394 aaPredicted RBP12.93□□□□□ -0.34
CPNE3-205ENST00000522240 SNX15Q9NRS6 342 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 WSB2Q9NYS7 404 aaPredicted RBP12.93□□□□□ -0.34
CPNE3-205ENST00000522240 TMPRSS11EQ9UL52 423 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 SLC39A10Q9ULF5 831 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 CYP8B1Q9UNU6 501 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 CRYL1Q9Y2S2 319 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 SPTBN4Q9H254 2564 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 BPTFQ12830 3046 aa12.93□□□□□ -0.34
CPNE3-205ENST00000522240 CCDC163A0A0D9SF12 145 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 A0A1W2PPM1 405 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 PRR23AA6NEV1 266 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 AP2A2O94973 939 aa12.92□□□□□ -0.34
CPNE3-205ENST00000522240 PDGFBP01127 241 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms