RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 RLN3Q8WXF3 142 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 TSPAN17Q96FV3 270 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 TOE1Q96GM8 510 aaKnown RBP21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 OLFM1Q99784 485 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 SELENOSQ9BQE4 189 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 P2RY12Q9H244 342 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 VPS11Q9H270 941 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 PCMTD2Q9NV79 361 aa21.17■□□□□ 0.98
R3HCC1-208ENST00000522012 SLC31A1O15431 190 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 PHGDHO43175 533 aaKnown RBP21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 MTX2O75431 263 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 RHOBTB1O94844 696 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 ESR1P03372 595 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 MSH3P20585 1137 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 CD6P30203 668 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 NSG1P42857 185 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 CCR3P51677 355 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 ADARP55265 1226 aaKnown RBP21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 CDKN2DP55273 166 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 RAB10P61026 200 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 CTSL3PQ5NE16 218 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 LDLRAP1Q5SW96 308 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 ZNF648Q5T619 568 aaPredicted RBP21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 PHYKPLQ8IUZ5 450 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 CEP97Q8IW35 865 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 CLDN19Q8N6F1 224 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 DDHD1Q8NEL9 900 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 ISL2Q96A47 359 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 SLC13A1Q9BZW2 595 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 MBNL1Q9NR56 388 aaKnown RBP21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 DLGAP2Q9P1A6 1054 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 TLK1Q9UKI8 766 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 CNOT6Q9ULM6 557 aaKnown RBP21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 PCDHB1Q9Y5F3 818 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 PRSS21Q9Y6M0 314 aa21.16■□□□□ 0.98
R3HCC1-208ENST00000522012 CFAP99D6REC4 459 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 MPOP05164 745 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 PYGLP06737 847 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 NR1D1P20393 614 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 RPS3P23396 243 aaKnown RBP eCLIP21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 CRABP2P29373 138 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 MAGEA12P43365 314 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 B4GALNT1Q00973 533 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 SLC18A2Q05940 514 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 ZNF460Q14592 562 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 IRF4Q15306 451 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 SH2D5Q6ZV89 423 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 TRIM69Q86WT6 500 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 TP53I13Q8NBR0 393 aaPredicted RBP21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 ACMSDQ8TDX5 336 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 ALKBH8Q96BT7 664 aaKnown RBP21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 FAM136AQ96C01 138 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 LENG8Q96PV6 779 aaPredicted RBP21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 SPATA6Q9NWH7 488 aaPredicted RBP21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 WSB2Q9NYS7 404 aaPredicted RBP21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 OGFRQ9NZT2 677 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 GNPTGQ9UJJ9 305 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 COMMD10Q9Y6G5 202 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 BDP1A6H8Y1 2624 aa21.15■□□□□ 0.98
R3HCC1-208ENST00000522012 IGLV3-16A0A075B6K0 115 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 A0A096LPK6 155 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 RAD51BO15315 384 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 NIPSNAP2O75323 286 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 C2P06681 752 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 RALBP11234 206 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 CHRM3P20309 590 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 PPP2R2AP63151 447 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 PDE1CQ14123 709 aaPredicted RBP21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 TAF1BQ53T94 588 aaPredicted RBP21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 ADAMTSL4Q6UY14 1074 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 DET1Q7L5Y6 550 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 FAM160A2Q8N612 972 aaPredicted RBP21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 FRMD1Q8N878 549 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 BANPQ8N9N5 519 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 FAM76AQ8TAV0 307 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 HEXDCQ8WVB3 486 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 ASB12Q8WXK4 309 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 GPR174Q9BXC1 333 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 FZD3Q9NPG1 666 aa21.14■□□□□ 0.98
R3HCC1-208ENST00000522012 SCN8AQ9UQD0 1980 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 IGHV1OR15-9A0A0B4J2B8 117 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 TMEM221A6NGB7 291 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 IQCF5A8MTL0 148 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 E5RI56 91 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 M0R296 226 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 COPEO14579 308 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 POLR3GO15318 223 aaPredicted RBP21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 ATP1B2P14415 290 aaPredicted RBP21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 AOC1P19801 751 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 FDXRP22570 491 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 PLA2G5P39877 138 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 CCNFP41002 786 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 INPP5AQ14642 412 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 ZKSCAN8Q15776 578 aaPredicted RBP21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 KHDC1Q4VXA5 237 aaKnown RBP21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 TRIM74Q86UV6 250 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 PIM3Q86V86 326 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 CENPTQ96BT3 561 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 FAM122AQ96E09 287 aa21.14■□□□□ 0.97
R3HCC1-208ENST00000522012 HIC2Q96JB3 615 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms