RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 IGLV3-16A0A075B6K0 115 aa23.9■■□□□ 1.42
PVT1-212ENST00000521951 A0A087WUV0 522 aaPredicted RBP23.9■■□□□ 1.42
PVT1-212ENST00000521951 TMEM202A6NGA9 273 aa23.9■■□□□ 1.42
PVT1-212ENST00000521951 PRR5-ARHGAP8B1AHC4 643 aa23.9■■□□□ 1.42
PVT1-212ENST00000521951 ASMTLO95671 621 aa23.9■■□□□ 1.42
PVT1-212ENST00000521951 S1PR4O95977 384 aa23.9■■□□□ 1.42
PVT1-212ENST00000521951 HSD17B3P37058 310 aa23.9■■□□□ 1.42
PVT1-212ENST00000521951 PPARGP37231 505 aaPredicted RBP23.9■■□□□ 1.42
PVT1-212ENST00000521951 THOP1P52888 689 aa23.9■■□□□ 1.42
PVT1-212ENST00000521951 B4GALNT1Q00973 533 aa23.9■■□□□ 1.42
PVT1-212ENST00000521951 TMEM115Q12893 351 aaPredicted RBP23.9■■□□□ 1.42
PVT1-212ENST00000521951 ITIH4Q14624 930 aa23.9■■□□□ 1.42
PVT1-212ENST00000521951 ADGRG6Q86SQ4 1221 aa23.9■■□□□ 1.42
PVT1-212ENST00000521951 C2CD4AQ8NCU7 369 aaPredicted RBP23.9■■□□□ 1.42
PVT1-212ENST00000521951 SCG3Q8WXD2 468 aaKnown RBP23.9■■□□□ 1.42
PVT1-212ENST00000521951 CDKL2Q92772 493 aa23.9■■□□□ 1.42
PVT1-212ENST00000521951 BOCQ9BWV1 1114 aa23.9■■□□□ 1.42
PVT1-212ENST00000521951 ACSS3Q9H6R3 686 aa23.9■■□□□ 1.42
PVT1-212ENST00000521951 TLR4O00206 839 aa23.89■■□□□ 1.42
PVT1-212ENST00000521951 VILLO15195 856 aa23.89■■□□□ 1.42
PVT1-212ENST00000521951 OR1I1O60431 355 aa23.89■■□□□ 1.42
PVT1-212ENST00000521951 NDUFS3O75489 264 aa23.89■■□□□ 1.42
PVT1-212ENST00000521951 AKT1P31749 480 aa23.89■■□□□ 1.42
PVT1-212ENST00000521951 DPP6P42658 865 aa23.89■■□□□ 1.42
PVT1-212ENST00000521951 POLD2P49005 469 aa23.89■■□□□ 1.42
PVT1-212ENST00000521951 MPP1Q00013 466 aa23.89■■□□□ 1.42
PVT1-212ENST00000521951 ZNF789Q5FWF6 425 aa23.89■■□□□ 1.42
PVT1-212ENST00000521951 DOK6Q6PKX4 331 aa23.89■■□□□ 1.42
PVT1-212ENST00000521951 DCP2Q8IU60 420 aaKnown RBP23.89■■□□□ 1.42
PVT1-212ENST00000521951 MREGQ8N565 214 aa23.89■■□□□ 1.42
PVT1-212ENST00000521951 WDR92Q96MX6 357 aa23.89■■□□□ 1.42
PVT1-212ENST00000521951 CYTH2Q99418 400 aa23.89■■□□□ 1.42
PVT1-212ENST00000521951 OR2AG1Q9H205 316 aa23.89■■□□□ 1.42
PVT1-212ENST00000521951 FBXO6Q9NRD1 293 aaPredicted RBP23.89■■□□□ 1.42
PVT1-212ENST00000521951 ATXN10Q9UBB4 475 aa23.89■■□□□ 1.42
PVT1-212ENST00000521951 SMG5Q9UPR3 1016 aaKnown RBP23.89■■□□□ 1.42
PVT1-212ENST00000521951 EPN2O95208 641 aa23.89■■□□□ 1.41
PVT1-212ENST00000521951 MSH3P20585 1137 aa23.89■■□□□ 1.41
PVT1-212ENST00000521951 HTR1BP28222 390 aa23.89■■□□□ 1.41
PVT1-212ENST00000521951 HOXD12P35452 270 aa23.89■■□□□ 1.41
PVT1-212ENST00000521951 EFTUD2Q15029 972 aaKnown RBP eCLIP23.89■■□□□ 1.41
PVT1-212ENST00000521951 TEAD4Q15561 434 aa23.89■■□□□ 1.41
PVT1-212ENST00000521951 ENPP7Q6UWV6 458 aa23.89■■□□□ 1.41
PVT1-212ENST00000521951 KIAA0408Q6ZU52 694 aa23.89■■□□□ 1.41
PVT1-212ENST00000521951 CTAGE3PQ8IX95 158 aa23.89■■□□□ 1.41
PVT1-212ENST00000521951 HEXDCQ8WVB3 486 aa23.89■■□□□ 1.41
PVT1-212ENST00000521951 HNRNPLLQ8WVV9 542 aaKnown RBP23.89■■□□□ 1.41
PVT1-212ENST00000521951 DCUN1D1Q96GG9 259 aa23.89■■□□□ 1.41
PVT1-212ENST00000521951 INTS10Q9NVR2 710 aaKnown RBP23.89■■□□□ 1.41
PVT1-212ENST00000521951 PSAT1Q9Y617 370 aa23.89■■□□□ 1.41
PVT1-212ENST00000521951 UQCRHLA0A096LP55 91 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 SPTY2D1-AS1A0A0U1RR47 76 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 PFDN6O15212 129 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 VEGFDO43915 354 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 MAGEC1O60732 1142 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 CDK14O94921 469 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 AHSGP02765 367 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 CEACAM5P06731 702 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 UQCRHP07919 91 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 KELP23276 732 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 GABRB3P28472 473 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 LEPRP48357 1165 aaKnown RBP23.88■■□□□ 1.41
PVT1-212ENST00000521951 PTK2BQ14289 1009 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 RNF187Q5TA31 235 aaPredicted RBP23.88■■□□□ 1.41
PVT1-212ENST00000521951 MACC1Q6ZN28 852 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 MARK2Q7KZI7 788 aaKnown RBP23.88■■□□□ 1.41
PVT1-212ENST00000521951 SLC26A11Q86WA9 606 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 SPATS2Q86XZ4 545 aaKnown RBP23.88■■□□□ 1.41
PVT1-212ENST00000521951 RBFAQ8N0V3 343 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 PPM1NQ8N819 430 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 RASGEF1AQ8N9B8 481 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 SUMF1Q8NBK3 374 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 OR56A4Q8NGH8 313 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 LPGAT1Q92604 370 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 SKA1Q96BD8 255 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 FAM86C1Q9NVL1 165 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 VPS18Q9P253 973 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 SLC17A4Q9Y2C5 497 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 PIKFYVEQ9Y2I7 2098 aa23.88■■□□□ 1.41
PVT1-212ENST00000521951 CACNA1EQ15878 2313 aa23.87■■□□□ 1.41
PVT1-212ENST00000521951 CFAP99D6REC4 459 aa23.87■■□□□ 1.41
PVT1-212ENST00000521951 HAUS5O94927 633 aa23.87■■□□□ 1.41
PVT1-212ENST00000521951 RALBP11234 206 aa23.87■■□□□ 1.41
PVT1-212ENST00000521951 ATP1B2P14415 290 aaPredicted RBP23.87■■□□□ 1.41
PVT1-212ENST00000521951 ZNF7P17097 686 aaPredicted RBP23.87■■□□□ 1.41
PVT1-212ENST00000521951 ZNF8P17098 575 aaPredicted RBP23.87■■□□□ 1.41
PVT1-212ENST00000521951 NSG1P42857 185 aa23.87■■□□□ 1.41
PVT1-212ENST00000521951 FZD2Q14332 565 aa23.87■■□□□ 1.41
PVT1-212ENST00000521951 DUOXA1Q1HG43 343 aa23.87■■□□□ 1.41
PVT1-212ENST00000521951 BEND6Q5SZJ8 279 aaPredicted RBP23.87■■□□□ 1.41
PVT1-212ENST00000521951 LAIR1Q6GTX8 287 aa23.87■■□□□ 1.41
PVT1-212ENST00000521951 PACS1Q6VY07 963 aa23.87■■□□□ 1.41
PVT1-212ENST00000521951 GALNT7Q86SF2 657 aa23.87■■□□□ 1.41
PVT1-212ENST00000521951 NAT14Q8WUY8 206 aa23.87■■□□□ 1.41
PVT1-212ENST00000521951 ZCCHC2Q9C0B9 1178 aaKnown RBP23.87■■□□□ 1.41
PVT1-212ENST00000521951 FGF22Q9HCT0 170 aa23.87■■□□□ 1.41
PVT1-212ENST00000521951 NSMCE4AQ9NXX6 385 aa23.87■■□□□ 1.41
PVT1-212ENST00000521951 VPS9D1Q9Y2B5 631 aa23.87■■□□□ 1.41
PVT1-212ENST00000521951 CRYL1Q9Y2S2 319 aa23.87■■□□□ 1.41
PVT1-212ENST00000521951 PRSS21Q9Y6M0 314 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms