RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 UBXN10Q96LJ8 280 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 TCF12Q99081 682 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 EFHD1Q9BUP0 239 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 ZFP14Q9HCL3 533 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.26□□□□□ -0.61
CLK4-206ENST00000520878 CAPN8A6NHC0 703 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 LEFTY2O00292 366 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 KPNA3O00505 521 aaPredicted RBP11.26□□□□□ -0.61
CLK4-206ENST00000520878 ABLIM3O94929 683 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 PRLP01236 227 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 FGBP02675 491 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 PRDX3P30048 256 aaKnown RBP11.26□□□□□ -0.61
CLK4-206ENST00000520878 CACNG1Q06432 222 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 CBLBQ13191 982 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 GRB7Q14451 532 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 NRF1Q16656 503 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 GPRIN3Q6ZVF9 776 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 STK40Q8N2I9 435 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 TMEM151AQ8N4L1 468 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 ENDOVQ8N8Q3 282 aaKnown RBP11.26□□□□□ -0.61
CLK4-206ENST00000520878 CYB5D2Q8WUJ1 264 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 C3orf30Q96M34 536 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 SEZ6LQ9BYH1 1024 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 GSTO2Q9H4Y5 243 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 TFB2MQ9H5Q4 396 aaKnown RBP11.26□□□□□ -0.61
CLK4-206ENST00000520878 RIC8BQ9NVN3 520 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 KLQ9UEF7 1012 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 E7ENX8 843 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 RAD51BO15315 384 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 DIO3P55073 304 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 DNAJB13P59910 316 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 TEAD2Q15562 447 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 PLEKHG6Q3KR16 790 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 AMIGO2Q86SJ2 522 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 TMEM25Q86YD3 366 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 OVCA2Q8WZ82 227 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 TRIM54Q9BYV2 358 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 MTG2Q9H4K7 406 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 ACTR8Q9H981 624 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 PDFQ9HBH1 243 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 ARL15Q9NXU5 204 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 APPL1Q9UKG1 709 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 DNAJC15Q9Y5T4 150 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 WNT6Q9Y6F9 365 aa11.26□□□□□ -0.61
CLK4-206ENST00000520878 RNF103-CHMP3A0A140T963 221 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 HNF1BP35680 557 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 PTGER3P43115 390 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 PPP3CCP48454 512 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 AP1S1P61966 158 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 CPSF6Q16630 551 aaKnown RBP eCLIP11.25□□□□□ -0.61
CLK4-206ENST00000520878 TTLL9Q3SXZ7 439 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 TIGD2Q4W5G0 525 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 ATP6AP1LQ52LC2 224 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 NCEH1Q6PIU2 408 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 NECAB2Q7Z6G3 386 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 RBFAQ8N0V3 343 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 PGAM4Q8N0Y7 254 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 KIAA1191Q96A73 305 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 TCEAL4Q96EI5 215 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 CNBD2Q96M20 576 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 KLHL32Q96NJ5 620 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 LINC00597Q9H2U6 94 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 C11orf49Q9H6J7 331 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 STK39Q9UEW8 545 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 OGDHLQ9ULD0 1010 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 TBC1D30Q9Y2I9 924 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 LCHNA4D1U4 455 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 ZNF839A8K0R7 811 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 UBFD1O14562 309 aaKnown RBP11.25□□□□□ -0.61
CLK4-206ENST00000520878 TRIM24O15164 1050 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 KERAO60938 352 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 CAPN1P07384 714 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 GGT5P36269 586 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 GRIA3P42263 894 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 HK2P52789 917 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 ST8SIA6P61647 398 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 LRRC26Q2I0M4 334 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 REP15Q6BDI9 236 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 USP45Q70EL2 814 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 TCEAL8Q8IYN2 117 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 DCAF4L2Q8NA75 395 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 NSMCE3Q96MG7 304 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 ECSITQ9BQ95 431 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 FAM126AQ9BYI3 521 aaPredicted RBP11.25□□□□□ -0.61
CLK4-206ENST00000520878 SLC4A7Q9Y6M7 1214 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.25□□□□□ -0.61
CLK4-206ENST00000520878 TARM1B6A8C7 271 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 ZNF140P52738 457 aaPredicted RBP11.25□□□□□ -0.61
CLK4-206ENST00000520878 POLE2P56282 527 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 FOXD4Q12950 439 aaPredicted RBP11.25□□□□□ -0.61
CLK4-206ENST00000520878 CEACAM7Q14002 265 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 CCNIQ14094 377 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 RBBP5Q15291 538 aaKnown RBP11.25□□□□□ -0.61
CLK4-206ENST00000520878 IYDQ6PHW0 289 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 KLHDC10Q6PID8 442 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 ACDQ96AP0 544 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 COPS8Q99627 209 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 SLC46A2Q9BY10 475 aa11.25□□□□□ -0.61
CLK4-206ENST00000520878 NSUN3Q9H649 340 aaKnown RBP11.25□□□□□ -0.61
CLK4-206ENST00000520878 IPPKQ9H8X2 491 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms