RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 SMOC1Q9H4F8 434 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 ANKZF1Q9H8Y5 726 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 FGF22Q9HCT0 170 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 DNAAF2Q9NVR5 837 aaKnown RBP17.23■□□□□ 0.35
TRAM1-203ENST00000520700 MOCS1Q9NZB8 636 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 ATXN10Q9UBB4 475 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 KLQ9UEF7 1012 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 PNMA8BQ9ULN7 279 aaPredicted RBP17.23■□□□□ 0.35
TRAM1-203ENST00000520700 CHMP2BQ9UQN3 213 aa17.23■□□□□ 0.35
TRAM1-203ENST00000520700 PRSS38A1L453 326 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 OR51F1A6NGY5 319 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 DNAJC6O75061 913 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 TNFP01375 233 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 OGNP20774 298 aaKnown RBP17.22■□□□□ 0.35
TRAM1-203ENST00000520700 MAGEA4P43358 317 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 CDKN1CP49918 316 aaPredicted RBP17.22■□□□□ 0.35
TRAM1-203ENST00000520700 HNRNPKP61978 463 aaKnown RBP eCLIP17.22■□□□□ 0.35
TRAM1-203ENST00000520700 HLTFQ14527 1009 aaKnown RBP eCLIP17.22■□□□□ 0.35
TRAM1-203ENST00000520700 FASTKD3Q14CZ7 662 aaKnown RBP17.22■□□□□ 0.35
TRAM1-203ENST00000520700 SF3A2Q15428 464 aaKnown RBP17.22■□□□□ 0.35
TRAM1-203ENST00000520700 TCEAL6Q6IPX3 200 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 PACS1Q6VY07 963 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 DBX2Q6ZNG2 339 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 PRR23CQ6ZRP0 262 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 TAS2R42Q7RTR8 314 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 CALML6Q8TD86 181 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 UBXN4Q92575 508 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 TCEAL3Q969E4 200 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 GAREM1Q9H706 876 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 CATSPERZQ9NTU4 200 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 TRNAU1APQ9NX07 287 aaKnown RBP17.22■□□□□ 0.35
TRAM1-203ENST00000520700 KLF15Q9UIH9 416 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 GPR34Q9UPC5 381 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 TMEM98Q9Y2Y6 226 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 PCDHGB2Q9Y5G2 931 aa17.22■□□□□ 0.35
TRAM1-203ENST00000520700 DNMT3AQ9Y6K1 912 aaPredicted RBP17.22■□□□□ 0.35
TRAM1-203ENST00000520700 CFAP99D6REC4 459 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 CDX4O14627 284 aaPredicted RBP17.21■□□□□ 0.35
TRAM1-203ENST00000520700 GPR39O43194 453 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 PCDHGA12O60330 932 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 SPAG6O75602 509 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 CDK14O94921 469 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 RALBP11234 206 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 TTPAP49638 278 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 SHBQ15464 509 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 DBN1Q16643 649 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 TYSND1Q2T9J0 566 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 KHDC1Q4VXA5 237 aaKnown RBP17.21■□□□□ 0.35
TRAM1-203ENST00000520700 PYCR3Q53H96 274 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 CCNI2Q6ZMN8 369 aaPredicted RBP17.21■□□□□ 0.35
TRAM1-203ENST00000520700 SDCCAG8Q86SQ7 713 aaPredicted RBP17.21■□□□□ 0.35
TRAM1-203ENST00000520700 TRIM74Q86UV6 250 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 ANKMY2Q8IV38 441 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 CNTN4Q8IWV2 1026 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 PALM2Q8IXS6 379 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 PHACTR4Q8IZ21 702 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 GABPB2Q8TAK5 448 aaPredicted RBP17.21■□□□□ 0.35
TRAM1-203ENST00000520700 GSDMBQ8TAX9 411 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 GDAP1Q8TB36 358 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 OR2AG1Q9H205 316 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 FAM96AQ9H5X1 160 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 NFU1Q9UMS0 254 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 CSNK1G3Q9Y6M4 447 aa17.21■□□□□ 0.35
TRAM1-203ENST00000520700 DMDP11532 3685 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 MYO15AQ9UKN7 3530 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 WDR87Q6ZQQ6 2873 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 RALGAPA1Q6GYQ0 2036 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 KLHL33A6NCF5 533 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 H3BM21 787 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 PFDN6O15212 129 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 KCNJ13O60928 360 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 AP2A2O94973 939 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 ASMTLO95671 621 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 TUBBP07437 444 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 ATP1B2P14415 290 aaPredicted RBP17.2■□□□□ 0.34
TRAM1-203ENST00000520700 ZNF8P17098 575 aaPredicted RBP17.2■□□□□ 0.34
TRAM1-203ENST00000520700 JUNDP17535 347 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 MSH3P20585 1137 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 NSG1P42857 185 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 POLD2P49005 469 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 ADARP55265 1226 aaKnown RBP17.2■□□□□ 0.34
TRAM1-203ENST00000520700 B4GALNT1Q00973 533 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 SLC14A1Q13336 389 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 THOC5Q13769 683 aaKnown RBP17.2■□□□□ 0.34
TRAM1-203ENST00000520700 SLMAPQ14BN4 828 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 HP1BP3Q5SSJ5 553 aaPredicted RBP17.2■□□□□ 0.34
TRAM1-203ENST00000520700 RNF187Q5TA31 235 aaPredicted RBP17.2■□□□□ 0.34
TRAM1-203ENST00000520700 WDR93Q6P2C0 686 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 KANSL1Q7Z3B3 1105 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 GALNT7Q86SF2 657 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 CILP2Q8IUL8 1156 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 MINDY1Q8N5J2 469 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 RASGEF1AQ8N9B8 481 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 TSACCQ96A04 125 aaPredicted RBP17.2■□□□□ 0.34
TRAM1-203ENST00000520700 CERS2Q96G23 380 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 DCUN1D1Q96GG9 259 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 TTC25Q96NG3 672 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 FAM167BQ9BTA0 163 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 SLC13A1Q9BZW2 595 aa17.2■□□□□ 0.34
TRAM1-203ENST00000520700 RRAGDQ9NQL2 400 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms