RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 MIER2Q8N344 545 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 GALNT4Q8N4A0 578 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 TXNDC5Q8NBS9 432 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 ANKK1Q8NFD2 765 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 SHKBP1Q8TBC3 707 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 DQX1Q8TE96 717 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 TSPEARQ8WU66 669 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 HEXDCQ8WVB3 486 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 MYLPFQ96A32 169 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 PPWD1Q96BP3 646 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 TCEAL4Q96EI5 215 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 C19orf60Q96EN9 201 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 PCED1BQ96HM7 432 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 PPP1R36Q96LQ0 422 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 KLHL32Q96NJ5 620 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 GPR78Q96P69 363 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 SMOQ99835 787 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 TMEM79Q9BSE2 394 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 ANKRD60Q9BZ19 345 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 RBM38Q9H0Z9 239 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 SLC25A51Q9H1U9 297 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 BRD9Q9H8M2 597 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 CLK4Q9HAZ1 481 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 CSNK1G1Q9HCP0 422 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 CRTAC1Q9NQ79 661 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 TMPRSS4Q9NRS4 437 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 ABCC13Q9NSE7 274 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 TREX1Q9NSU2 369 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 TMEM45AQ9NWC5 275 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 CDV3Q9UKY7 258 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 CNOT6Q9ULM6 557 aaKnown RBP8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 PCDHGA7Q9Y5G6 932 aa8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 EP300Q09472 2414 aaPredicted RBP8.59□□□□□ -1.03
CTNNA1-223ENST00000520520 CACNA1IQ9P0X4 2223 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 FANCMQ8IYD8 2048 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 GOLGA8CPA6NN73 597 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 WASH4PA8MWX3 477 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 H3BNH8 94 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 VILLO15195 856 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 PFDN6O15212 129 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 AKAP10O43572 662 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 CRCPO75575 148 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 TRMUO75648 421 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 RNASEH2AO75792 299 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 FYNP06241 537 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 SBK3P0C264 359 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 BMP2P12643 396 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 GJA1P17302 382 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 IMPDH1P20839 514 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 ADRA1AP35348 466 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 ARCN1P48444 511 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 NDST2P52849 883 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 NME5P56597 212 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 PRAMEP78395 509 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 SOX4Q06945 474 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 SPEM2Q0P670 501 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 MTAPQ13126 283 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 OLIG2Q13516 323 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 RAB33AQ14088 237 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 CSHL1Q14406 222 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 CYTH1Q15438 398 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 GEN1Q17RS7 908 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 TSTD2Q5T7W7 516 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 HECTD2Q5U5R9 776 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 IL23RQ5VWK5 629 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 TMEM198Q66K66 360 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 MRNIPQ6NTE8 343 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 THSD4Q6ZMP0 1018 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 ZNF852Q6ZMS4 543 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 ATG14Q6ZNE5 492 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 GPR141Q7Z602 305 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 CLYBLQ8N0X4 340 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 TMEM151AQ8N4L1 468 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 RTL3Q8N8U3 475 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 MFSD2AQ8NA29 543 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 C3orf58Q8NDZ4 430 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 ADAM32Q8TC27 787 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 SPPL2BQ8TCT7 592 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 USP33Q8TEY7 942 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 OSCP1Q8WVF1 389 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 NDRG1Q92597 394 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 CELF6Q96J87 481 aaKnown RBP8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 SLC45A3Q96JT2 553 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 MARK4Q96L34 752 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 UROC1Q96N76 676 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 SERPINB11Q96P15 392 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 ACBD6Q9BR61 282 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 TRIM54Q9BYV2 358 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 ARNT2Q9HBZ2 717 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 IGSF5Q9NSI5 407 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 RBM22Q9NW64 420 aaKnown RBP eCLIP8.58□□□□□ -1.041e-6■■■□□ 19.1
CTNNA1-223ENST00000520520 ZSCAN32Q9NX65 697 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 UBAP1Q9NZ09 502 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 UBP1Q9NZI7 540 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 TMEM181Q9P2C4 612 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 MTRRQ9UBK8 725 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 GMEB2Q9UKD1 530 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 FBXO4Q9UKT5 387 aa8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 FAF1Q9UNN5 650 aaPredicted RBP8.58□□□□□ -1.04
CTNNA1-223ENST00000520520 TRAF6Q9Y4K3 522 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms