RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 NRROSQ86YC3 692 aa18.19■□□□□ 0.5
SREK1-207ENST00000520058 TRAPPC5Q8IUR0 188 aa18.19■□□□□ 0.5
SREK1-207ENST00000520058 PRELID2Q8N945 189 aa18.19■□□□□ 0.5
SREK1-207ENST00000520058 DDHD1Q8NEL9 900 aa18.19■□□□□ 0.5
SREK1-207ENST00000520058 CCDC74AQ96AQ1 378 aa18.19■□□□□ 0.5
SREK1-207ENST00000520058 DCUN1D1Q96GG9 259 aa18.19■□□□□ 0.5
SREK1-207ENST00000520058 SYNDIG1Q9H7V2 258 aa18.19■□□□□ 0.5
SREK1-207ENST00000520058 EIF2B3Q9NR50 452 aaKnown RBP18.19■□□□□ 0.5
SREK1-207ENST00000520058 SMOXQ9NWM0 555 aa18.19■□□□□ 0.5
SREK1-207ENST00000520058 LRIT1Q9P2V4 623 aa18.19■□□□□ 0.5
SREK1-207ENST00000520058 FKBPLQ9UIM3 349 aa18.19■□□□□ 0.5
SREK1-207ENST00000520058 TMX2-CTNND1H3BSU7 103 aa18.18■□□□□ 0.5
SREK1-207ENST00000520058 LDB2O43679 373 aa18.18■□□□□ 0.5
SREK1-207ENST00000520058 NOBOXO60393 691 aa18.18■□□□□ 0.5
SREK1-207ENST00000520058 KCNJ1P48048 391 aa18.18■□□□□ 0.5
SREK1-207ENST00000520058 ZNF140P52738 457 aaPredicted RBP18.18■□□□□ 0.5
SREK1-207ENST00000520058 TMPRSS15P98073 1019 aa18.18■□□□□ 0.5
SREK1-207ENST00000520058 TARDBPQ13148 414 aaKnown RBP eCLIP18.18■□□□□ 0.53e-6■□□□□ 9.9
SREK1-207ENST00000520058 HLTFQ14527 1009 aaKnown RBP eCLIP18.18■□□□□ 0.5
SREK1-207ENST00000520058 GPR33Q49SQ1 333 aa18.18■□□□□ 0.5
SREK1-207ENST00000520058 CRTC3Q6UUV7 619 aa18.18■□□□□ 0.5
SREK1-207ENST00000520058 RBM44Q6ZP01 1051 aaKnown RBP18.18■□□□□ 0.5
SREK1-207ENST00000520058 SNX20Q7Z614 316 aa18.18■□□□□ 0.5
SREK1-207ENST00000520058 OR52K1Q8NGK4 314 aa18.18■□□□□ 0.5
SREK1-207ENST00000520058 PTCD2Q8WV60 388 aaKnown RBP18.18■□□□□ 0.5
SREK1-207ENST00000520058 TBRG4Q969Z0 631 aaKnown RBP eCLIP18.18■□□□□ 0.5
SREK1-207ENST00000520058 MS4A14Q96JA4 679 aa18.18■□□□□ 0.5
SREK1-207ENST00000520058 GFM1Q96RP9 751 aaKnown RBP18.18■□□□□ 0.5
SREK1-207ENST00000520058 TTC1Q99614 292 aa18.18■□□□□ 0.5
SREK1-207ENST00000520058 TIMM29Q9BSF4 260 aa18.18■□□□□ 0.5
SREK1-207ENST00000520058 AP1M1Q9BXS5 423 aa18.18■□□□□ 0.5
SREK1-207ENST00000520058 OSGEPL1Q9H4B0 414 aa18.18■□□□□ 0.5
SREK1-207ENST00000520058 NLE1Q9NVX2 485 aaPredicted RBP18.18■□□□□ 0.5
SREK1-207ENST00000520058 PRKAB1Q9Y478 270 aa18.18■□□□□ 0.5
SREK1-207ENST00000520058 DNMT3AQ9Y6K1 912 aaPredicted RBP18.18■□□□□ 0.5
SREK1-207ENST00000520058 FAM149AA5PLN7 773 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 KLHL33A6NCF5 533 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 UGT1A9O60656 530 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 MTX2O75431 263 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 ECEL1O95672 775 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 ZNF7P17097 686 aaPredicted RBP18.17■□□□□ 0.5
SREK1-207ENST00000520058 UGT1A6P19224 532 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 UGT1A1P22309 533 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 UGT1A4P22310 534 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 ADRA1DP25100 572 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 UGT1A3P35503 534 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 UGT1A5P35504 534 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 CLCNKAP51800 687 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 CDK16Q00536 496 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 MSLNQ13421 630 aaPredicted RBP18.17■□□□□ 0.5
SREK1-207ENST00000520058 NFATC2Q13469 925 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 PTPRCAPQ14761 206 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 PERM1Q5SV97 790 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 ZNF648Q5T619 568 aaPredicted RBP18.17■□□□□ 0.5
SREK1-207ENST00000520058 GPRC6AQ5T6X5 926 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 CCDC137Q6PK04 289 aaKnown RBP18.17■□□□□ 0.5
SREK1-207ENST00000520058 SLC9B2Q86UD5 537 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 ARL14Q8N4G2 192 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 DCBLD1Q8N8Z6 715 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 PPHLN1Q8NEY8 458 aaKnown RBP18.17■□□□□ 0.5
SREK1-207ENST00000520058 OR13C4Q8NGS5 318 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 SH3KBP1Q96B97 665 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 NXPE2Q96DL1 559 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 NAPGQ99747 312 aaPredicted RBP18.17■□□□□ 0.5
SREK1-207ENST00000520058 UGT1A7Q9HAW7 530 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 UGT1A10Q9HAW8 530 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 UGT1A8Q9HAW9 530 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 KLC4Q9NSK0 619 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 BFARQ9NZS9 450 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 KCNK6Q9Y257 313 aa18.17■□□□□ 0.5
SREK1-207ENST00000520058 CTAGE9A4FU28 777 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 USP27XA6NNY8 438 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 H7C0S8 307 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 SNX2O60749 519 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 KRT14P02533 472 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 ZSCAN5DPP0CG00 497 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 F3P13726 295 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 IDSP22304 550 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 MC4RP32245 332 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 PAFAH1B1P43034 410 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 GPR3P46089 330 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 PPM1FP49593 454 aaPredicted RBP18.16■□□□□ 0.5
SREK1-207ENST00000520058 CYP1B1Q16678 543 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 ZRANB3Q5FWF4 1079 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 CDCP2Q5VXM1 449 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 CCNJLQ8IV13 435 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 NAGSQ8N159 534 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 COG1Q8WTW3 980 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 GATA6Q92908 595 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 CNTNAP3BQ96NU0 1288 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 RANBP9Q96S59 729 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 COPS8Q99627 209 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 CNTNAP3Q9BZ76 1288 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 PYCARDQ9ULZ3 195 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 PLEKHM1Q9Y4G2 1056 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 KCTD3Q9Y597 815 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 SAR1BQ9Y6B6 198 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 RNF215Q9Y6U7 377 aa18.16■□□□□ 0.5
SREK1-207ENST00000520058 KIR2DS5A0A0G2JLQ3 304 aa18.15■□□□□ 0.5
SREK1-207ENST00000520058 A0A0G2JNG1 304 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms