RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 FEM1CQ96JP0 617 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 BTN2A3PQ96KV6 586 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 SPATA17Q96L03 361 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 HSPA12BQ96MM6 686 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 PGLYRP2Q96PD5 576 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 C19orf43Q9BQ61 176 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 C1QTNF3Q9BXJ4 246 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 ZYG11BQ9C0D3 744 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 ELAC1Q9H777 363 aaKnown RBP5.04□□□□□ -1.6
SDC2-204ENST00000519914 ZNF408Q9H9D4 720 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 EFCAB1Q9HAE3 211 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 PDFQ9HBH1 243 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 EML4Q9HC35 981 aaKnown RBP5.04□□□□□ -1.6
SDC2-204ENST00000519914 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.04□□□□□ -1.6
SDC2-204ENST00000519914 NDUFA13Q9P0J0 144 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 DLGAP2Q9P1A6 1054 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 CACNG4Q9UBN1 327 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 SUCOQ9UBS9 1254 aaKnown RBP5.04□□□□□ -1.6
SDC2-204ENST00000519914 SLC2A6Q9UGQ3 507 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 RAB26Q9ULW5 256 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 PADI4Q9UM07 663 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 SLC4A7Q9Y6M7 1214 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 UTRNP46939 3433 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 COL4A6Q14031 1691 aa5.04□□□□□ -1.6
SDC2-204ENST00000519914 ZNF106Q9H2Y7 1883 aaKnown RBP5.04□□□□□ -1.6
SDC2-204ENST00000519914 TCRBV3S1A0A5B6 114 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 DYTNA2CJ06 578 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 CCDC162PA2VCL2 907 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 PRAMEF27A3QJZ7 478 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 BBIP1A8MTZ0 92 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 PRR33A8MZF0 331 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.03□□□□□ -1.6
SDC2-204ENST00000519914 H3BS24 57 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 TRIM38O00635 465 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 CA12O43570 354 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 LDB2O43679 373 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 PRAMEF11O60813 436 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 PDE5AO76074 875 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 TMCC1O94876 653 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 FGF1P05230 155 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 ITGB1P05556 798 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 PDHA1P08559 390 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 CTSHP09668 335 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 RAG1P15918 1043 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 VCLP18206 1134 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 ME2P23368 584 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 EPHA3P29320 983 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 DPP6P42658 865 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 RANBP1P43487 201 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 ABCG1P45844 678 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 TM4SF4P48230 202 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 HSPA13P48723 471 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 THOP1P52888 689 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 EPHB1P54762 984 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 HUNKP57058 714 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 TBX4P57082 545 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 TIAL1Q01085 375 aaKnown RBP eCLIP5.03□□□□□ -1.66e-7■■■□□ 16.7
SDC2-204ENST00000519914 GRIK2Q13002 908 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 STX5Q13190 355 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 CTBP1Q13363 440 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 SERINC3Q13530 473 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 CEACAM7Q14002 265 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 IHHQ14623 411 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 COQ5Q5HYK3 327 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 RBM20Q5T481 1227 aaKnown RBP5.03□□□□□ -1.6
SDC2-204ENST00000519914 ZBTB37Q5TC79 503 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 HECTD2Q5U5R9 776 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 MARC1Q5VT66 337 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 FOXB2Q5VYV0 432 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 ZNF470Q6ECI4 717 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 KLC3Q6P597 504 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 CNSTQ6PJW8 725 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 UGT2A3Q6UWM9 527 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 CYHR1Q6ZMK1 362 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 LARP4Q71RC2 724 aaKnown RBP eCLIP5.03□□□□□ -1.6
SDC2-204ENST00000519914 SLC24A5Q71RS6 500 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 RTN4RL1Q86UN2 441 aaPredicted RBP5.03□□□□□ -1.6
SDC2-204ENST00000519914 CUZD1Q86UP6 607 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 CHCHD4Q8N4Q1 142 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 SMYD1Q8NB12 490 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 PCSK9Q8NBP7 692 aaKnown RBP5.03□□□□□ -1.6
SDC2-204ENST00000519914 SLC26A7Q8TE54 656 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 USP33Q8TEY7 942 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 GDPD5Q8WTR4 605 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 C2orf15Q8WU43 125 aaKnown RBP5.03□□□□□ -1.6
SDC2-204ENST00000519914 PYDC1Q8WXC3 89 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 TRIB2Q92519 343 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 RCN3Q96D15 328 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 ASB9Q96DX5 294 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 HMCESQ96FZ2 354 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 ATXN7L3BQ96GX2 97 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 KIRREL1Q96J84 757 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 ELMO2Q96JJ3 720 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 SCYL1Q96KG9 808 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 TRIB3Q96RU7 358 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 DIRC2Q96SL1 478 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 TTC1Q99614 292 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 OLFM1Q99784 485 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 ADAM2Q99965 735 aa5.03□□□□□ -1.6
SDC2-204ENST00000519914 TTLL2Q9BWV7 592 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms