RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 TNNT1P13805 278 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 BPIP17213 487 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 ITGB6P18564 788 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 XRCC1P18887 633 aaPredicted RBP12.28□□□□□ -0.44
CSMD1-205ENST00000519623 COMTP21964 271 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 PTPN3P26045 913 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 CD68P34810 354 aaPredicted RBP12.28□□□□□ -0.44
CSMD1-205ENST00000519623 CDKN2BP42772 138 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 NR2C2P49116 596 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 EPHA4P54764 986 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 DYNLT1P63172 113 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 MC2RQ01718 297 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 WASHC5Q12768 1159 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 TBX2Q13207 712 aaPredicted RBP12.28□□□□□ -0.44
CSMD1-205ENST00000519623 KIR2DS5Q14953 304 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 PRKD1Q15139 912 aaPredicted RBP12.28□□□□□ -0.44
CSMD1-205ENST00000519623 PCSK7Q16549 785 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 SKOR2Q2VWA4 1001 aaPredicted RBP12.28□□□□□ -0.44
CSMD1-205ENST00000519623 SNAP47Q5SQN1 464 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 DCAF12Q5T6F0 453 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 ANKS6Q68DC2 871 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 PDPK2PQ6A1A2 396 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 RHOT1Q8IXI2 618 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 ZSCAN1Q8NBB4 408 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 CCDC112Q8NEF3 446 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 GLYATL1Q969I3 302 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 PLEKHG4BQ96PX9 1271 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 TBC1D10AQ9BXI6 508 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 GPR63Q9BZJ6 419 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 FBXO8Q9NRD0 319 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 RAD18Q9NS91 495 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 KLC4Q9NSK0 619 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 DDX56Q9NY93 547 aaKnown RBP12.28□□□□□ -0.44
CSMD1-205ENST00000519623 PILRAQ9UKJ1 303 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 SPO11Q9Y5K1 396 aa12.28□□□□□ -0.44
CSMD1-205ENST00000519623 BOD1L1Q8NFC6 3051 aa12.27□□□□□ -0.44
CSMD1-205ENST00000519623 A0A0A6YYK5 440 aaPredicted RBP12.27□□□□□ -0.45
CSMD1-205ENST00000519623 LOC285095A0A1B0GVY8 99 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 PMPCBO75439 489 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 TPM1P09493 284 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 SLC2A4P14672 509 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 ZNF7P17097 686 aaPredicted RBP12.27□□□□□ -0.45
CSMD1-205ENST00000519623 SLC19A1P41440 591 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 ATP1A2P50993 1020 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 UBE2IP63279 158 aaKnown RBP12.27□□□□□ -0.45
CSMD1-205ENST00000519623 ADCY2Q08462 1091 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 LLGL1Q15334 1064 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 KHDC1Q4VXA5 237 aaKnown RBP12.27□□□□□ -0.45
CSMD1-205ENST00000519623 ZNF569Q5MCW4 686 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 FAM129CQ86XR2 697 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 PHYKPLQ8IUZ5 450 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 ZNF547Q8IVP9 402 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 RTP4Q96DX8 246 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 ARHGAP9Q9BRR9 750 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.27□□□□□ -0.45
CSMD1-205ENST00000519623 STN1Q9H668 368 aaKnown RBP12.27□□□□□ -0.45
CSMD1-205ENST00000519623 UCK1Q9HA47 277 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 STARD5Q9NSY2 213 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 UBP1Q9NZI7 540 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 OGFRQ9NZT2 677 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 ZNF624Q9P2J8 865 aaPredicted RBP12.27□□□□□ -0.45
CSMD1-205ENST00000519623 ALG6Q9Y672 507 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 MYO18BQ8IUG5 2567 aa12.27□□□□□ -0.45
CSMD1-205ENST00000519623 LILRA5A6NI73 299 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 KMOO15229 486 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 CST8O60676 142 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 MTX2O75431 263 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 EPOP01588 193 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 FAM87AP0C7U9 286 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 LIFP15018 202 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 PECAM1P16284 738 aaPredicted RBP12.26□□□□□ -0.45
CSMD1-205ENST00000519623 HMGCLP35914 325 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 PPM1FP49593 454 aaPredicted RBP12.26□□□□□ -0.45
CSMD1-205ENST00000519623 HADHBP55084 474 aaKnown RBP12.26□□□□□ -0.45
CSMD1-205ENST00000519623 RAB15P59190 212 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 NFATC3Q12968 1075 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 TFDP2Q14188 446 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 CLCA4Q14CN2 919 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 ODF2Q5BJF6 829 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 CCDC70Q6NSX1 233 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 CRTC3Q6UUV7 619 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 KDELC1Q6UW63 502 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 ABRAXAS1Q6UWZ7 409 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 SPOCD1Q6ZMY3 1216 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 TMEM26Q6ZUK4 368 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 BZW1Q7L1Q6 419 aaKnown RBP12.26□□□□□ -0.45
CSMD1-205ENST00000519623 TIPARPQ7Z3E1 657 aaKnown RBP12.26□□□□□ -0.45
CSMD1-205ENST00000519623 CACNA2D3Q8IZS8 1091 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 TTC30BQ8N4P2 665 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 IL22RA1Q8N6P7 574 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 TFB1MQ8WVM0 346 aaKnown RBP12.26□□□□□ -0.45
CSMD1-205ENST00000519623 TEFMQ96QE5 360 aaKnown RBP12.26□□□□□ -0.45
CSMD1-205ENST00000519623 SRPK1Q96SB4 655 aaKnown RBP12.26□□□□□ -0.45
CSMD1-205ENST00000519623 CTRCQ99895 268 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 TIMM29Q9BSF4 260 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 TSPY26PQ9H489 355 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 EPB41L1Q9H4G0 881 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 APMAPQ9HDC9 416 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 BPIFA1Q9NP55 256 aa12.26□□□□□ -0.45
CSMD1-205ENST00000519623 FAM153AQ9UHL3 310 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms