RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	TAF1A	Q15573	450 aa	Predicted RBP	23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	INSC	Q1MX18	579 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	PARP6	Q2NL67	630 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	LDLRAP1	Q5SW96	308 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	RANBP10	Q6VN20	620 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	RAB11FIP2	Q7L804	512 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	SFRP1	Q8N474	314 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	FBXO39	Q8N4B4	442 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	HNRNPLL	Q8WVV9	542 aa	Known RBP	23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	SLC46A1	Q96NT5	459 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	SLC38A3	Q99624	504 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	CMKLR1	Q99788	373 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	TIMM29	Q9BSF4	260 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	LDHAL6B	Q9BYZ2	381 aa	Predicted RBP	23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	ZMYND15	Q9H091	742 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	IL26	Q9NPH9	171 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	KCNK4	Q9NYG8	393 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	KCNK6	Q9Y257	313 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	APC2	O95996	2303 aa		23.89	■■□□□ 1.41
CNOT7-204	ENST00000518885	ASXL3	Q9C0F0	2248 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	CHUK	O15111	745 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	PSMD3	O43242	534 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	TLX3	O43711	291 aa	Predicted RBP	23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	KCNJ13	O60928	360 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	ITGA2B	P08514	1039 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	JMJD7	P0C870	316 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	F3	P13726	295 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	PPM1F	P49593	454 aa	Predicted RBP	23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	OR1D5	P58170	312 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	AMZ1	Q400G9	498 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	ATP13A5	Q4VNC0	1218 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	BROX	Q5VW32	411 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	ZNF662	Q6ZS27	426 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	SFTPA2	Q8IWL1	248 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	AHCYL2	Q96HN2	611 aa	Known RBP	23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	C19orf43	Q9BQ61	176 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	TBL1Y	Q9BQ87	522 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	FOXP3	Q9BZS1	431 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	OSGEPL1	Q9H4B0	414 aa		23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	SARS2	Q9NP81	518 aa	Known RBP	23.88	■■□□□ 1.41
CNOT7-204	ENST00000518885	LAMA5	O15230	3695 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885		A0A0U1RQJ8	604 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	SNX2	O60749	519 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	STIP1	P31948	543 aa	Known RBP	23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	ADRA1A	P35348	466 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	HHEX	Q03014	270 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	RPS6KA1	Q15418	735 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	PHF19	Q5T6S3	580 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	C19orf48	Q6RUI8	117 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	FAM151B	Q6UXP7	276 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	LRRC8A	Q8IWT6	810 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	FAM71D	Q8N9W8	422 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	OR10G6	Q8NH81	332 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	SLC37A2	Q8TED4	501 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	PATE1	Q8WXA2	126 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	LRRC40	Q9H9A6	602 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	ARFGAP3	Q9NP61	516 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	ASCL3	Q9NQ33	180 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	KLC4	Q9NSK0	619 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	TBC1D29	Q9UFV1	150 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	ATXN7L1	Q9ULK2	861 aa	Predicted RBP	23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	ZFHX4	Q86UP3	3567 aa		23.87	■■□□□ 1.41
CNOT7-204	ENST00000518885	RP1	P56715	2156 aa		23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	B4GAT1	O43505	415 aa		23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	DUX1	O43812	170 aa		23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	TNFSF15	O95150	251 aa		23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	ZNF7	P17097	686 aa	Predicted RBP	23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	HADHA	P40939	763 aa		23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	ZFP36L1	Q07352	338 aa	Known RBP	23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	TMEM115	Q12893	351 aa	Predicted RBP	23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	TRA2A	Q13595	282 aa	Known RBP eCLIP	23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	COL28A1	Q2UY09	1125 aa		23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	IYD	Q6PHW0	289 aa		23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	CRTC3	Q6UUV7	619 aa		23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	B3GNT8	Q7Z7M8	397 aa		23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	TRAPPC5	Q8IUR0	188 aa		23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	ZNF514	Q96K75	400 aa	Predicted RBP	23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	DPH1	Q9BZG8	443 aa		23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	EPB41L1	Q9H4G0	881 aa		23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	SMOX	Q9NWM0	555 aa		23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	CHD6	Q8TD26	2715 aa		23.86	■■□□□ 1.41
CNOT7-204	ENST00000518885	PPM1D	O15297	605 aa		23.85	■■□□□ 1.41
CNOT7-204	ENST00000518885	UCN	P55089	124 aa		23.85	■■□□□ 1.41
CNOT7-204	ENST00000518885	SQSTM1	Q13501	440 aa		23.85	■■□□□ 1.41
CNOT7-204	ENST00000518885	TRIM58	Q8NG06	486 aa		23.85	■■□□□ 1.41
CNOT7-204	ENST00000518885	SLC35B2	Q8TB61	432 aa		23.85	■■□□□ 1.41
CNOT7-204	ENST00000518885	KCNE4	Q8WWG9	221 aa		23.85	■■□□□ 1.41
CNOT7-204	ENST00000518885	GORASP1	Q9BQQ3	440 aa		23.85	■■□□□ 1.41
CNOT7-204	ENST00000518885	ARNT2	Q9HBZ2	717 aa		23.85	■■□□□ 1.41
CNOT7-204	ENST00000518885	LOXL2	Q9Y4K0	774 aa		23.85	■■□□□ 1.41
CNOT7-204	ENST00000518885	CFAP47	Q6ZTR5	3102 aa		23.85	■■□□□ 1.41
CNOT7-204	ENST00000518885	ITPR1	Q14643	2758 aa		23.85	■■□□□ 1.41
CNOT7-204	ENST00000518885	IGHV1OR21-1	A0A087WYE8	117 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	KLHL33	A6NCF5	533 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	HGS	O14964	777 aa	Predicted RBP	23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	GAS8	O95995	478 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	IDS	P22304	550 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	CD1C	P29017	333 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	UGT1A5	P35504	534 aa		23.84	■■□□□ 1.41
CNOT7-204	ENST00000518885	EPHA4	P54764	986 aa		23.84	■■□□□ 1.41

Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms