RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 MGME1Q9BQP7 344 aa3.31□□□□□ -1.88
RNU6-840P-201ENST00000517275 THUMPD3Q9BV44 507 aaKnown RBP3.31□□□□□ -1.88
RNU6-840P-201ENST00000517275 MOV10L1Q9BXT6 1211 aaKnown RBP3.31□□□□□ -1.88
RNU6-840P-201ENST00000517275 CATSPERBQ9H7T0 1116 aa3.31□□□□□ -1.88
RNU6-840P-201ENST00000517275 KRCC1Q9NPI7 259 aaPredicted RBP3.31□□□□□ -1.88
RNU6-840P-201ENST00000517275 MTRRQ9UBK8 725 aa3.31□□□□□ -1.88
RNU6-840P-201ENST00000517275 DNAJB9Q9UBS3 223 aa3.31□□□□□ -1.88
RNU6-840P-201ENST00000517275 SLC9A2Q9UBY0 812 aa3.31□□□□□ -1.88
RNU6-840P-201ENST00000517275 TTC7AQ9ULT0 858 aaPredicted RBP3.31□□□□□ -1.88
RNU6-840P-201ENST00000517275 TRAV34A0A0B4J273 112 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 IGHV4-28A0A0C4DH34 117 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 A0A1W2PP11 408 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 HTR3EA5X5Y0 456 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 EIF4E1BA6NMX2 242 aaKnown RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 ENO4A6NNW6 628 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 FAM90A26D6RGX4 464 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 MS4A18H0YCH9 400 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 H0YIN7 160 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 IFIT3O14879 490 aaKnown RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 HSPA12AO43301 675 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 TADA2AO75478 443 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 RBMXL2O75526 392 aaKnown RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 SLU7O95391 586 aaKnown RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 ZFYP08048 801 aaPredicted RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 SUPT20HL2P0C7V6 817 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 GJA1P17302 382 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 ADRA2CP18825 462 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 ITGB8P26012 769 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 PCGF2P35227 344 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 EIF2S3P41091 472 aaKnown RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 ALDH3A2P51648 485 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 SEC61BP60468 96 aaKnown RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 TUBB4BP68371 445 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 ZNF91Q05481 1191 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 PRKCZQ05513 592 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 FOXM1Q08050 763 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 CTTNQ14247 550 aaKnown RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 MORF4L2Q15014 288 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 LETM2Q2VYF4 491 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 SUPT20HL1Q3ZLR7 823 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 CAVIN1Q6NZI2 390 aaKnown RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 BRAT1Q6PJG6 821 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 SLC16A12Q6ZSM3 486 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 ZNF534Q76KX8 674 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 MON1BQ7L1V2 547 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 PIWIL3Q7Z3Z3 882 aaKnown RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 ABI3BPQ7Z7G0 1075 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 CHERPQ8IWX8 916 aaKnown RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 PM20D2Q8IYS1 436 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 CCAR2Q8N163 923 aaKnown RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 NUP93Q8N1F7 819 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 PCDH20Q8N6Y1 951 aaKnown RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 GRK7Q8WTQ7 553 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 TMEM174Q8WUU8 243 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 ROBO4Q8WZ75 1007 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 INPP5DQ92835 1189 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 APBB2Q92870 758 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 SECISBP2LQ93073 1101 aaKnown RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 GRAMD2BQ96HH9 432 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 MUS81Q96NY9 551 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 FNBP1Q96RU3 617 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 PCED1AQ9H1Q7 454 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 CNOT10Q9H9A5 744 aaKnown RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 COPS7BQ9H9Q2 264 aaPredicted RBP3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 TMEM184CQ9NVA4 438 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 TINAGQ9UJW2 476 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 CDC14AQ9UNH5 594 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 POMT1Q9Y6A1 747 aa3.3□□□□□ -1.88
RNU6-840P-201ENST00000517275 KRTAP9-6A0A140TA67 174 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 FEZF1A0PJY2 475 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 TMEM221A6NGB7 291 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 OR6C76A6NM76 312 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 KRTAP9-7A8MTY7 169 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 H3BQ06 376 aaPredicted RBP3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 J3KR12 359 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 TIMM23O14925 209 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 CLIC2O15247 247 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 SPINT2O43291 252 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 FMO6PO60774 539 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 ZNF217O75362 1048 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 GAGE7O76087 117 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 CELF2O95319 508 aaKnown RBP3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 VNN2O95498 520 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 BCL10O95999 233 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 EGFP01133 1207 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 GAGE12FP0CL80 117 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 GAGE12GP0CL81 117 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 GAGE12IP0CL82 117 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 PFKFB1P16118 471 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 KCNA5P22460 613 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 HOXD9P28356 352 aaPredicted RBP3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 PTH2RP49190 550 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 BMXP51813 675 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 P2RX3P56373 397 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 TMPRSS3P57727 454 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 SSBP2P81877 361 aaPredicted RBP3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 CDK3Q00526 305 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 HSPB3Q12988 150 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 GAGE1Q13065 139 aa3.29□□□□□ -1.88
RNU6-840P-201ENST00000517275 GAGE4Q13068 117 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms